Gene Dfer_2845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2845 
Symbol 
ID8226418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3510362 
End bp3511423 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content46% 
IMG OID644930675 
Productprotein of unknown function DUF1016 
Protein accessionYP_003087225 
Protein GI255036604 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.24838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.105001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACA TCATAAACGC CTCGCTTTTC AACACGGTAA AAGACCTTAT ACAGGCCAGT 
AAGCAACAGA TTGCCATTTC TGTGAATGCA GAAATGAGTA TGCTCTACTG GAAAATTGGC
ACGGTAATCC GGCAGGAAAT CCTGAAACAG GAGAGGGCAG AATACGGAAA GCAAATTGTC
GCGACACTGT CGCGACAATT GGAAGATGTG TATGGACAGT CATTTTCAGA AAAAAGTCTG
AGGAGAATGA TCCAGTTTGC AGAGCTTTTT CCTGAGGAAC AAATTGTCGT GTCACTGATA
CGACAATTGA GTTGGTCTCA TTTTATGGAA ATTCTCCCAT TTCAAGACCC CATCAAACGC
GAATTCTACA TTCAAATGTG CATCCACGAG AAGTGGAGCG TGCGCACATT CCGGGAGCGG
ATTCAATCCA TGCTCTACGA GCGAACGGCC ATTAGCAAAA AGCCCGAGGA CGTGATCATC
AATGACCTGC ATCTGCTCAA AAGCGAACAA AAGCTCAATC CTGACCTCGT TTTCAAAGAC
CCTTACTTTC TTGATTTCCT CGGCTTGAAG GACGCCTATT CGGAGAAAGA TCTCGAAGCT
TCGATTATCG TGGAATTGCA GCGTTTCATC ATCGAGATAG GCACCGATTT CGCATTCATG
GCCCGGCAGA AGCGCATTAC TATCGACCAC CGGGATTATT TCATCGATTT GCTCTTTTAT
CACCGACGGC TGAAATGCCT TGTCGTTGTC GATTTGAAAA TGGGTGAATT TGAAGCGGGT
TTTAAAGGCC AAATGGAGCT TTACCTTCGG TTTTTGGAGA AGTACGAAAA GATACAAGGT
GAAAATGACC CGATCGGTTT GATTTTGTGC TCAGGCAAAA GCAGCGAACA CATCGAATTA
ATGCAGCTGG GCAAAAGCAA CATTCGCGTC GCCGATTACC TGACGGCGCT GCCTTCACAA
CAGGTTTTGC AGGAGAAACT GCATAAGGCA GTCGAGATCG CGCGGCACAA GATGGAGCAG
CGGGAATACA CCAATACCAA AACGGGCCTG CCAAGTGATT AG
 
Protein sequence
MDNIINASLF NTVKDLIQAS KQQIAISVNA EMSMLYWKIG TVIRQEILKQ ERAEYGKQIV 
ATLSRQLEDV YGQSFSEKSL RRMIQFAELF PEEQIVVSLI RQLSWSHFME ILPFQDPIKR
EFYIQMCIHE KWSVRTFRER IQSMLYERTA ISKKPEDVII NDLHLLKSEQ KLNPDLVFKD
PYFLDFLGLK DAYSEKDLEA SIIVELQRFI IEIGTDFAFM ARQKRITIDH RDYFIDLLFY
HRRLKCLVVV DLKMGEFEAG FKGQMELYLR FLEKYEKIQG ENDPIGLILC SGKSSEHIEL
MQLGKSNIRV ADYLTALPSQ QVLQEKLHKA VEIARHKMEQ REYTNTKTGL PSD