Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2842 |
Symbol | |
ID | 8226415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3506963 |
End bp | 3508486 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644930672 |
Product | altronate oxidoreductase |
Protein accession | YP_003087222 |
Protein GI | 255036601 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00101076 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0729645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCAATC TCTTCCGGGA AAACCTCCGC CAGCTCAGGA ACCAGCCCGC TGTGGTCGTG GCCGATGATT CGGTGTTCCA GCTGCCTGAA AAAGTTTTGC AGTTCGGCAC CGGCGCATTC CTCCGCGGCC TGGCCGATTA TTTCATAGAC AAAGCCAACC GGCAAGGCGT TTTCAACGGC CGGATCGTGG TCGTCAAATC GACCGACCAG GGCGATACCA AGGCATTTGA AAGGCAGGAT AACCTGTACA CGATCTGTTC CCGCGGCATT CAGGATGGCG AGGCGAAGGA AGAAAACATC ATTTCGTCGG CCATTAGCCG CGTGCTTTCG GCCAAAACAC AATGGTCGCT CGTGCTGGAC CTCGCTAAAA ACCCAGCCGT CGGCATCGTG ATCTCGAACA CGACCGAAAC CGGCATCCAG CTCGTACAGG ACGACATTTA CCAATGGCCG CCCGTGTCGT TTCCCGGCAA GCTGCTCGCG TTTTTGTATG CACGTTACGT CGCATTCAAC GGCAGCGCGG ACAGCGGTGT GGTCATTATC CCAACCGAAC TCATCGCCGA AAACGGCAAA AAACTCGAAT CTATTATCCT CGAACTCGCG CACCGGAACG GGTTGGAAGT TGCGTTTATC GATTGGATCG AGCAATGCAA CTTCTTCTGC AACTCGCTCG TCGACCGCAT CGTGCCCGGC AAACCCGACG AAACACGATT GAAAGAGCTG GAAGAAGAGC TGGGCTACCG CGACGAGCTG CTGATTACCA CCGAGCATTA CCACTTGTGG GCGATCGAAG GCGACGAGCA AATCCGGCAA AAAATCGGCT TTTACGGCAT CGACGAGGGG CTTATCATCG AACCGGACAT TGAGCAATAC CGCGAACTAA AACTCCGCCT GCTGAACGGC GCGCACACAT TAGGCGGCGG CCTGGCCCAT TTGTGCGGTT TCAAAACCGT GGTAGAAGCG ATGAGCGATC CGTTTTTTTC CGCTTTTATC ACCCATCTGA TGGAAAGCGA AATTGCGACG GCCATTCCCT ACGACGTCCG CCCCGCCGTG GCGCTGGCAT TCAGCCGCCA GGTAGCCGAC CGCTTCCGCA ATCCGCACAT ATTGCATAAG TGGTTCAATA TCAATCAGAA TTATTCTGCC AAGATTCTTT CACGGGTTAT CCCTACTTAC CTGAACTACG AGGCCCGGAA CGGCTACCTG CCCGAATACA TGACATTTGG CCTGGCCGTA TTCATCCATT ATATGAAAGT GGTAAAGAAA GAAGGCGACA ACTATTACGG TCGCCTGGAA GGAGTTCCTT ACCTGATCCA GGACCCGAAA GCGCCTTTCT TTTATCAAAA ATGGCAAATG GCATCGCTGC CCGATATGGT GCAGGCTATT CTCAAAGACG CGTCGATCTG GGGGCGCGAC CTCAACAAAG TTGAATCTGT CCACAGTTCC ATTGTAAAAT ATCTTCAATC CATCGCTCAG AACGGCGTTG CGGAAACACT TAAAACGCTT CTTGAAAGAA CAGAATATGC TTAA
|
Protein sequence | MGNLFRENLR QLRNQPAVVV ADDSVFQLPE KVLQFGTGAF LRGLADYFID KANRQGVFNG RIVVVKSTDQ GDTKAFERQD NLYTICSRGI QDGEAKEENI ISSAISRVLS AKTQWSLVLD LAKNPAVGIV ISNTTETGIQ LVQDDIYQWP PVSFPGKLLA FLYARYVAFN GSADSGVVII PTELIAENGK KLESIILELA HRNGLEVAFI DWIEQCNFFC NSLVDRIVPG KPDETRLKEL EEELGYRDEL LITTEHYHLW AIEGDEQIRQ KIGFYGIDEG LIIEPDIEQY RELKLRLLNG AHTLGGGLAH LCGFKTVVEA MSDPFFSAFI THLMESEIAT AIPYDVRPAV ALAFSRQVAD RFRNPHILHK WFNINQNYSA KILSRVIPTY LNYEARNGYL PEYMTFGLAV FIHYMKVVKK EGDNYYGRLE GVPYLIQDPK APFFYQKWQM ASLPDMVQAI LKDASIWGRD LNKVESVHSS IVKYLQSIAQ NGVAETLKTL LERTEYA
|
| |