Gene Dfer_2819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2819 
Symbol 
ID8226392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3484941 
End bp3486128 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content54% 
IMG OID644930649 
Productgalactokinase 
Protein accessionYP_003087199 
Protein GI255036578 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0153] Galactokinase 
TIGRFAM ID[TIGR00131] galactokinase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACCA CAGAAACCGA TATCGCAGAG GGTATCCAGG ACAAGTATTT TTTGAAATTC 
GGCACCGCCA CGCGCGAAAC TGTGCGCGTG TTCCGCTCCC CCGGCCGCAT TAACCTCATC
GGCGAGCATA CCGACTACAA CAATGGCTTC GTGCTGCCCG CGAGCGTGGA CAAAGCCGTG
TATTTTGTGA TCGCCCCGCG CGAGGACGAC CAGGTGATCC TCTACGCCGC CGACCTCGAC
CAAACCTATG CATTCTCACT CGACGACCTT TCGAAGCCCG AAAAGTCGTG GCCGCATTAC
CAGATCGGTA TTGTGGAGCA AATCCAAAAG AAGGGTTTGA AAATCGGCGG TTTTCAGGCG
GCATTCGGCG GTAATGTGCC GGTAGGCGCC GGGCTGTCGT CGTCGGCGGC ACTGGAATGC
TGCCTGCTGT TTGCCTTGAA CGAAATTTAC GGATTGAACC TCGACCGTTT CAGCATTGTG
AAAATGTCGC AAAAATCTGA AAATGAATAT GTAGGCGTAC AATGCGGCAT TATGGACCAG
TTTGCTTCGG CATTTGGCAA GGAAGAATCG GTGATCCGCC TGGACTGCCG CTCGCTCGAA
TACGAGTACT TCCCGTTCCC GATGGACGAC TACCTGATCG TGCTTTGCGA TACGATGGTG
AAGCATTCAC TCGCCAGCTC CGAATACAAC ACCCGTCGGC AGGAATGCGA AAAAGGCACT
GCCATACTGC AACAATACGA CGCCAATGTG CTGAGCCTCC GCGACGCGAC GCCCGCATTG
GTGGAAGAAC ATCAGGATGA AATGGGCGAT GTCGTGTACC GCCGCTGCAA ATTTATCACC
GAAGAAATCC AGCGGGTGCA GGATGCCTGC GACCTGCTCG TGCAAGGTAA TCTGCCCGAT
TTTGGTAAAA AAATGTATGA TACGCACTTC GGATTGCAAG ACGAATACGA GGTAAGCTGC
CCGGAACTCG ACTTCCTCGT GGCGCAGACA TTGGACGACG ACTCGGTGCT TGGCGCGCGG
ATGATGGGCG GCGGCTTCGG CGGTTGTACC ATTAATCTGG TGAAAAAAGA GGGTGTGGAT
GCTTTTGAAG CTAAAATGAA GCAGGCCTAT CTTGAAAAAT ACCAAATCGA CCTGCCTTGC
TACCGCGTGA AAATCACGGA CGGCACGGAG GAAGTCGCGC TCGCATAA
 
Protein sequence
MLTTETDIAE GIQDKYFLKF GTATRETVRV FRSPGRINLI GEHTDYNNGF VLPASVDKAV 
YFVIAPREDD QVILYAADLD QTYAFSLDDL SKPEKSWPHY QIGIVEQIQK KGLKIGGFQA
AFGGNVPVGA GLSSSAALEC CLLFALNEIY GLNLDRFSIV KMSQKSENEY VGVQCGIMDQ
FASAFGKEES VIRLDCRSLE YEYFPFPMDD YLIVLCDTMV KHSLASSEYN TRRQECEKGT
AILQQYDANV LSLRDATPAL VEEHQDEMGD VVYRRCKFIT EEIQRVQDAC DLLVQGNLPD
FGKKMYDTHF GLQDEYEVSC PELDFLVAQT LDDDSVLGAR MMGGGFGGCT INLVKKEGVD
AFEAKMKQAY LEKYQIDLPC YRVKITDGTE EVALA