Gene Dfer_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2812 
Symbol 
ID8226385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3475415 
End bp3477280 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content50% 
IMG OID644930642 
ProductCarbamoyltransferase 
Protein accessionYP_003087192 
Protein GI255036571 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2192] Predicted carbamoyl transferase, NodU family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TAGGCATCTC GGCTTTCTAT CACGACTCGG CTGCGGCTCT AATCGATAAT 
GGCGAAATTG TCGCCGCAGC ACAAGAGGAG CGCTTTACAC GAAAAAAGCA CGACCCAGGG
TTTCCCTCCA ATGCAGTTGC CTTTTGCCTA GAATATGGCG GGCTGTCTAT CAATGAGCTT
GATGCGATCG TCTTCTACGA CAAACCGCTC CTGAAATTTG AAAGATTATT AGAGACTTAC
TATGCCTTCG CACCTAAGGG TGTGCGGTCG TTCCTCACCG CGATGCCGGT CTGGATCAAA
GAAAAAATGT TCCTCAAAAG GCTCATTAAC GAAGAGCTGG AAAAGCTGGG CTACGACAAA
AAGAAGAAAA AAGTGAAGAT GCTCTTTCCT GAGCACCACC TTTCGCACGC AGCCAGCGCC
TACTACCCGT CCCCGTACGA AAAATCGGCG ATCCTTACCA TCGACGGCGT GGGCGAATGG
GCCACGGCTT CGATCTGCCT CGGTGAAGGA AAAGATATCA GCATTCTCAA AGAACTTCGC
TTCCCGCATT CACTCGGGTT GCTTTATTCC GCATTTACCT ACTTCCTGGG CTTCCGTGTG
AACTCAGGCG AATACAAACT GATGGGGCTT GCACCGTATG GTAACCCAAC ATCACCGGAT
ATTAAACGTT ACGAAGATAT TATTCTCAAA GAGCTCATCG ATCTGAAAGA AGACGGATCG
GTTTGGCTCA ACCAGGATTA TTTCGATTAT GCTACAGGTC TGAAAATGGT CAACGAGCAC
AAGTGGGAAG CATTGTTCGG ATTCAAAACC CGGAGGCCGG AAGATGCGCT CGAAGCCGTG
CATTGTAACC TCGGCCTCGC CATCCAGAAC ATTACCGAAG AAGCGGTTGT GAGAATGGCG
AAAGAAGCGA AACGACTCAC CGGCGCCGAT TACCTGTGTA TGGCAGGTGG TGTTGCATTG
AACTGTGTAT CAAACGGTAA GCTGCAAAAA GCGAACATTT TCAAAGACAT TTTCATTCAG
CCTGCTGCCG GTGATGCCGG TGGGGCGCTA GGTGCCGCGC AGGCTGCCTA TCACATCTAT
TACGGGCAGG AAAGAACAGT CACCTGGAAG GCCGATGCCA TGCGCGGTTC CTATCTCGGA
CCGACGTTCT CCGACCTCGA TGTGGCATTG ACTGCTAAGA AATATAAGGC CGTTTACACC
CATTACGAAA ACTTCAAAGA CCTCACGCAG GAAGCGGCAA GGCTTCTTTC CGAAGGCAAT
GTGGTAGGCT GGGTGCAAGG CCGGATGGAA TTCGGGCCGC GCGCATTGGG CGGACGAAGC
ATTTTGGGCG ATCCTCGGAA TGCCGAAATG CAGAAAAAGC TGAACCTTAA GATCAAATAC
CGCGAGTCGT TCCGGCCGTT TGCACCGTCG GTACTAGCCG AGGATTGCTC CGATTACTTT
GATTATGAGG GTATTTCTCC TTACATGCTG CTCGTTCACC CGGTGGCGGA AGGCCGCAGA
AAGCCGGTCC CTGCGAACTA CGGCTCGCTG GATTTGCGCG AAAAACTCTA TTTCGAGCGC
TCCGACCTGC CTTCGATCAC GCACATTGAC TATTCGGCGC GTATCCAAAC GGTCCACAAG
GAAACCAATC CACGCTATTA TGAGCTGATC GATACCTTTA AATCGATGAC GGGCTACGCG
GTGATCGTTA ATACGAGCTT CAACGTACGT GGGGAACCGA TAGTTTGTAC GCCAAACGAC
GCCTATCGTT GCTTCATGCG CACCGAAATG GATTACCTCG TGGTTGGTAA CTATATTTTT
GACAAAAAAC AGCAGCCGGA ATGGCTGGAA AAAGATAACT GGAAGGAAGA ATTCGTTCTC
GATTAA
 
Protein sequence
MKILGISAFY HDSAAALIDN GEIVAAAQEE RFTRKKHDPG FPSNAVAFCL EYGGLSINEL 
DAIVFYDKPL LKFERLLETY YAFAPKGVRS FLTAMPVWIK EKMFLKRLIN EELEKLGYDK
KKKKVKMLFP EHHLSHAASA YYPSPYEKSA ILTIDGVGEW ATASICLGEG KDISILKELR
FPHSLGLLYS AFTYFLGFRV NSGEYKLMGL APYGNPTSPD IKRYEDIILK ELIDLKEDGS
VWLNQDYFDY ATGLKMVNEH KWEALFGFKT RRPEDALEAV HCNLGLAIQN ITEEAVVRMA
KEAKRLTGAD YLCMAGGVAL NCVSNGKLQK ANIFKDIFIQ PAAGDAGGAL GAAQAAYHIY
YGQERTVTWK ADAMRGSYLG PTFSDLDVAL TAKKYKAVYT HYENFKDLTQ EAARLLSEGN
VVGWVQGRME FGPRALGGRS ILGDPRNAEM QKKLNLKIKY RESFRPFAPS VLAEDCSDYF
DYEGISPYML LVHPVAEGRR KPVPANYGSL DLREKLYFER SDLPSITHID YSARIQTVHK
ETNPRYYELI DTFKSMTGYA VIVNTSFNVR GEPIVCTPND AYRCFMRTEM DYLVVGNYIF
DKKQQPEWLE KDNWKEEFVL D