Gene Dfer_2795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2795 
Symbol 
ID8226368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3455855 
End bp3458344 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content54% 
IMG OID644930625 
Productpeptidase M14 carboxypeptidase A 
Protein accessionYP_003087175 
Protein GI255036554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0357907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.190508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC TGATCCGCTG CCTGTTTTTC CTGCTTTTCG TTCAGCCCGC GTGGGCGCAA 
AATCAGACAC CCGATCAGTT CCTGGGCTAT CGGCTCGGCT CGAAGTTCGC CTATCATCAT
TTGATCGTGG ATTATTTCAA ATCCATTCAG GCAAACAATG CCGACCGGAT GAAACTTATT
CAATACGGTA CAACTTACGA GGGCCGTCCG CTGATGCTCG CATTTATTTC ATCGCCCGAA
AACATGGCGA AGCTGGAAAC GATCCGGACT AATCACTTAA AGAGCATCGG TTTGCTGCCC
GGCAAGCCCG ATGCCGGCGT TCCGCCTATC GTGTGGCTGA GTTACAATGT GCACGGAAAC
GAGGCCGTTT CGGCCAATAC AAGCATGAAA GTGCTTTACG AGCTATTGAA TAAGGGCAAT
GCGCTCACGC AGCAGTTTCT GAAAGATATA GTGATACTCG TGGACCCGTG CATTAATCCC
GACGGCTACG AGCGCTACAC GCAATGGTAC AACCGCGTCC AGAACGCCAC GCCCGACGTG
ACGCCATTTG CCCTCGAACA CGACGAACCC TGGCCCGGCG GACGTTTTAA CCATTATCTT
TTCGACCTGA ACCGCGACTG GGCCTGGCAG ACGCAGAAAG AAACGCAGGA GCGCATTACC
CTATACAACC AGTGGATGCC GCATTTCCAC GCCGATTTCC ACGAAATGGG GCCGTCGAGG
AGCTATTATT TCCCTCCGGC TGCAAAACCC TACAACAAGG ATGTGACCAG CTGGCAAAGG
GAATTTAACG AGCTCATCGG CGAGTATTGC CGCAAGTATT TCGATCGGAA CCATTGGGCG
TACTTTACCC GCAATGATTA CGACCTGTTC TATCCCAGCT ACGGCGATAC CTGGCCCACC
GCAAATGGCG CCATAGGCGT TACCTACGAG CAGGGCGGCG GCGGACGGGC GGGCCTCGCG
CTCGAACGCG CCAGCGAGCA CGATACGCTC ACGCTCGACA GCCGCATCGC GCATCATTAC
GCGAGTACTC TCGCTACGCT GGAAGCGGTA ATGTCCCGGA AAGAGAAAGT GGTGAGTGAG
TTTATCCAAT TTCACCAGGA CGCGGCCGCC GCGCCGTTGG GAAGTTTTAA GACTTATGTA
ATTAAAACAG GCGGGCAGGC CCGGAACGCC CGGGCATTCG GGCAGTGGCT CGACAGGCAG
GGTTTCAGCT ACGGCGTGGC GGGCAAAGCC ATGTCTGCAA AAGGCACCGA ACTCACGTCG
CTGAACGAGC AAACCATCCG CATAGAAGAT AACGACTTGG TGATCAGCGC CTATCAACCG
AAATCCAACC TGCTCCGCAT TCTTTTCGAT CCCAAACCGG CGCTGGAAGA CTCTGTCACT
TACGATGTTA CCAGCTGGGG CTTGGCCTAT ATTTTCGGTT TGAAAGCTTA TGGTTTAAAG
GAAAAACTTA CTCCCGCCGC CGTACGTCCC GCGGCTTCCG ACAATGCTTT GCCGGAGTCG
TCGCCATATG CATACCTGGC CAACTGGTCG GAGTCCGGCG ATGCGGCATT TCTGGCAGAA
CTTTTAAAAG AGGGAGTGCT CGTGAAGACT TCCAACACGG CATTTGAAAT GGACAAAACC
AGTTATTCGG CAGGGACATT GATCATCCCC AAAAAAGGCA ATGAAGGCAT TCCGTTCGAT
AAACTGGTCA CATCGCTTGC CAATAAGCAT TTCGTAAGGC TCACGCCCGT AAAAACAGGC
TTCGTCAGCA GCGGCCCCGA CTTCGGTAAC GACAATGTGG TGGCATTAAA AGCCCCGAAA
GTGGTTGCCG TCGCAGGCGA CGGCATTTCG GCGACGGCTT TTGGGGCTAT CTGGCATTAT
TTCGAACAGC AGATCAAATA CCCGGTGACG ATCGTGAATG CCGCTAAACT GAATACGCTA
CCCTGGAATG AAATAGACGT CCTGATCCTG CCCGATGGGA GGTATAACGA CATCATCGGC
GAAAAACAGC TCGAAGGCAT TCAGAACTGG GTCAAAAACG GCGGCAAGCT CGTTGCCATG
GAGCGTGCCA CGGATGCATT CGTGAACAAG CCTGGATTCG GGCTCACGAA GAAGTTTTCC
GATAAAAGAA GGGATGACGA CACGTTCAAA AAATTCGGCG AGCAGCAGCG CGAAGAAGCC
AGCGACTCAT CGCCCGGCAG CATGTACCAG ATCACTATGG ACCGCACGCA TCCGCTCTCA
TTCGGCTGCG GCGACGAGTA TTTCACCATC GTCCGCGACG CCTACGAGCG CGATTACCTC
AAAGAAGGCT GGAACGTCGG CTACCTGAAA GACGACAATT ACAAAGCAGG GTTCGTAGGT
TCCAAAATGG CGGGCAAGCT AAAAAACACC CTCATCATCG GAGCCCAGGA AATGGGCCGC
GGCCAAGTCA TCTACCTCAT GGACGACCCC ATCTTCCGGG CAATGCTGGA AAAGGGGAAG
ATGCTGTTTG GGAATGTGGT GTTTAGGTAA
 
Protein sequence
MTKLIRCLFF LLFVQPAWAQ NQTPDQFLGY RLGSKFAYHH LIVDYFKSIQ ANNADRMKLI 
QYGTTYEGRP LMLAFISSPE NMAKLETIRT NHLKSIGLLP GKPDAGVPPI VWLSYNVHGN
EAVSANTSMK VLYELLNKGN ALTQQFLKDI VILVDPCINP DGYERYTQWY NRVQNATPDV
TPFALEHDEP WPGGRFNHYL FDLNRDWAWQ TQKETQERIT LYNQWMPHFH ADFHEMGPSR
SYYFPPAAKP YNKDVTSWQR EFNELIGEYC RKYFDRNHWA YFTRNDYDLF YPSYGDTWPT
ANGAIGVTYE QGGGGRAGLA LERASEHDTL TLDSRIAHHY ASTLATLEAV MSRKEKVVSE
FIQFHQDAAA APLGSFKTYV IKTGGQARNA RAFGQWLDRQ GFSYGVAGKA MSAKGTELTS
LNEQTIRIED NDLVISAYQP KSNLLRILFD PKPALEDSVT YDVTSWGLAY IFGLKAYGLK
EKLTPAAVRP AASDNALPES SPYAYLANWS ESGDAAFLAE LLKEGVLVKT SNTAFEMDKT
SYSAGTLIIP KKGNEGIPFD KLVTSLANKH FVRLTPVKTG FVSSGPDFGN DNVVALKAPK
VVAVAGDGIS ATAFGAIWHY FEQQIKYPVT IVNAAKLNTL PWNEIDVLIL PDGRYNDIIG
EKQLEGIQNW VKNGGKLVAM ERATDAFVNK PGFGLTKKFS DKRRDDDTFK KFGEQQREEA
SDSSPGSMYQ ITMDRTHPLS FGCGDEYFTI VRDAYERDYL KEGWNVGYLK DDNYKAGFVG
SKMAGKLKNT LIIGAQEMGR GQVIYLMDDP IFRAMLEKGK MLFGNVVFR