Gene Dfer_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2792 
Symbol 
ID8226364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3449778 
End bp3451703 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content51% 
IMG OID644930621 
Productpeptidase S15 
Protein accessionYP_003087172 
Protein GI255036551 
COG category[R] General function prediction only 
COG ID[COG2936] Predicted acyl esterases 
TIGRFAM ID[TIGR00976] putative hydrolase, CocE/NonD family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.185507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCTT TCTTGCGTAT TTTTGAATTT ACTTATCCAA ACAAAACCAA AGTCATGAAA 
AGAAATGTAT TGCTGTGTTT GCTATGCCTT CTGCATTGGG CGGTCATCGC TCAGAACCCG
GCCCCGGATA CGAGTTGGAT CAAGGCGAAC TACATCAAAA CAGAGCAATA CATTACCATG
CGCGACGGGG TGAGGCTATT TACCGCCATT TACACGCCCC GGGACAATTC TCAAACCTAC
CCGATCATCA TGCAGCGCAC GCCGTATTCG GTGCGGCCTT ATGGCGAGGG GAATTACCGC
CGTTCGCTCG GGCCTAATGT GCACCTCATG CGTGAGAAAT ACATTTTTGT ATATCAGGAT
GCCCGAGGCC GGTACAAAAG CGAAGGCACT TTCCGCGAAA TGACGCCCGC GATCCCGAAC
AAGAAGAGCA GCAAGGACGT GGACGAGTCG AGCGACACCC ATGAGACGGT CGAGTGGCTT
TTGAAAAATA CCAGAAACAA TGGGAAAGTG GGCCAATGGG GCATTTCGTT TCCTGGCTAC
TACTCGTCGG CGGGTCTGCC GGATGCCCAC CCGGCGATGA AAGCGGTGTC TCCGCAAGCG
CCGATGTCGG ACGAATTCAT CGGCGACGAT TGCTACCATA ACGGCGCATT CTTTCTCATG
GACAATTTCG GCTTTTACAG CGGTTTTGAC GGCCTCAAAA GCAAGGATGG CACCAATTAT
CAAAGCCATT TTAGCGTAGA ATATAAAGAC GCTTACAAAT ATTTTCTCGA ACTCGGCGCG
TTGAAAAAGA CCAATGCCGC GCCCTATTTC GCCGATCCGA ACAGCATTTG GCGGCAAACG
ACGGCCCATC CCGTGTATGA CGAGTTCTGG CAGTCGCGGA ACATTAAAAG ACATTTGAAA
AACATCAAAC CCGCGGTGCT CGTGGTAGGC GGGTGGTTTG ATGCGGAGGA TTTGTATGGT
GCATTGAAAA CCTATGCGGC CATTGAGAAA CAAAGCCCGG GCAACAACAA CCGGCTGGTA
ATGGGCCCCT GGACGCACGG AGGCTGGGCG GCGCCTGCCT GGAAGGGCTT TGCCCGCTAT
CAGTTTGGCG CGGATGTGAA CAAATACTAT CAGGAGGAGA TCGAAACGAA GTTTTTCAAT
CACTACCTCA AAGGAAAAGG CACTTTTGAG CAGCCGGAGG TTACCGTTTT TGAGACAGGA
TCAAATGAAT GGAAGCACTA CGACGTTTGG CCGCCGGCAA ACAGCAAGCC AACGCCCTAT
TATTTCGGGC CAAATGGCAA ATTAGCGGTG GAAAAGCCCA CTCCCAGCAC CAGCCTAACC
AACTATGAAA GCGATCCTGC GAACCCGGTG CCTTACACCA GCGTAACTAG CGGGCATCGC
AACAACGAAT ATATGGCAGA GGACCAGCGT TTCGCATCAC AGCGACCGGA TGTGCTCAGT
TTTCAAACGG ATTCATTATC GGAAGACCTC ACTCTAACTG GCGAAATCGT TGCGGACCTG
ATGGTGTCCA TGACCGGCTC CGACGCCGAT TTTATCGTGA AAGTAATAGA CGTGTGGCCC
GCAGGCTCAT CCGTAACAGC AGTTAAGGAA GGGGAAAAGG CCGTTGATAT GAGCGGTTAC
CAGCAAATGG TGCGTGCGGA AGTACTACGC GGCAAGTTCA GGAATAATTT TTCGAAGCCG
GAACCGTTTG CAAAAGGTAA GATCGAGCAG GTTACGGTCA AACTGAACGA AGTCGCGCAC
ACATTCAAAA AGGGCCACCG TGTGATGGTG CAGATACAAA GCAGCTGGTT CCCGCTGGTG
GATCGCAATC CGCAGAAATT CATGAACATT TTTGAGGCAT CGGAATCTGA CTTTCAGAAG
TCGGAGATTT CGATCCATCA CAATGCCGAC AACCCGAGCA GGATTACTTT GCCTGTCCTG
CGCTGA
 
Protein sequence
MYAFLRIFEF TYPNKTKVMK RNVLLCLLCL LHWAVIAQNP APDTSWIKAN YIKTEQYITM 
RDGVRLFTAI YTPRDNSQTY PIIMQRTPYS VRPYGEGNYR RSLGPNVHLM REKYIFVYQD
ARGRYKSEGT FREMTPAIPN KKSSKDVDES SDTHETVEWL LKNTRNNGKV GQWGISFPGY
YSSAGLPDAH PAMKAVSPQA PMSDEFIGDD CYHNGAFFLM DNFGFYSGFD GLKSKDGTNY
QSHFSVEYKD AYKYFLELGA LKKTNAAPYF ADPNSIWRQT TAHPVYDEFW QSRNIKRHLK
NIKPAVLVVG GWFDAEDLYG ALKTYAAIEK QSPGNNNRLV MGPWTHGGWA APAWKGFARY
QFGADVNKYY QEEIETKFFN HYLKGKGTFE QPEVTVFETG SNEWKHYDVW PPANSKPTPY
YFGPNGKLAV EKPTPSTSLT NYESDPANPV PYTSVTSGHR NNEYMAEDQR FASQRPDVLS
FQTDSLSEDL TLTGEIVADL MVSMTGSDAD FIVKVIDVWP AGSSVTAVKE GEKAVDMSGY
QQMVRAEVLR GKFRNNFSKP EPFAKGKIEQ VTVKLNEVAH TFKKGHRVMV QIQSSWFPLV
DRNPQKFMNI FEASESDFQK SEISIHHNAD NPSRITLPVL R