Gene Dfer_2773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2773 
Symbol 
ID8226345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3430558 
End bp3431640 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content50% 
IMG OID644930602 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_003087153 
Protein GI255036532 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.577233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAACG TCACTAAAAC CTTTCTACCC GATCAGGAAG AATATCTGCA ATATGTCCGT 
GGAATCTGGG AACGTGGTTA TCTGACCAAC AACGGACCAC TTTTACAACA GCTCGAAGGA
CAGCTGAAAG AATATTTGAA CGTAGATTAC CTTTACTTCT GCGGTAATGG AACGATCGTT
CTGCAAATCG CGATCAAGGC GCTGGAACTG AAAGGCGAGA TCATCACGAC GCCCTTCTCC
TACTGCGCCA CTTCCAACGC GATTTTGTGG GAAAACTGCA CGCCTGTCTT TGTAGACATC
GACGCGGCGA CATTCAACAT CAATGCAGAA CTGATCGAAG CGTCGATCAC CCCGGCGACG
TCGGCCATTC TCGCTACACA CGTGTACGGC AACCCCTGCG ACGTGGAAGC GATCGAGGCG
ATTGCACAAA AGCATAACCT GAAAGTGATA TACGACGCCG CACACGCGTT CGGCGTTACC
TATAAAGGCA AATCCCTGCT TTCCTACGGC GACCTGAGCA CATGCAGCTT CCACGCTACG
AAAGTGTTCC ATACCATCGA AGGCGGTGCT TTGATTTCCA ACCATCCTGA ACTCGACCGC
AAGCTGCATC TCCTGCGCGC ATTCGGCCAC CAGGGCGACG AGCATTATGA GTTCGCCGGC
ATCAATGGCA AAAACTCGGA ATTTCATGCG GCCATGGGAT TGGTGAACCT GCCGCAGGTA
CCGGCCATCA TCCAGGCACG CAAGGAAGTG TTCGAGGCTT ACGATAGCCT GCTCAACTGG
GATATTCTGT TCAAACCGAC GCTTAGCGCC GACATTGAGT ACAACTACGC CTATTATCCG
GTAGTATTTC CTTCGGAAGC GGTGATGTTC AGGGTAATGG AAGCGCTGAA AGTCGGAGAA
ATCATTCCAC GCAGATATTT TTATCCCTCG CTGAACACCC TTTCTTTCAT GCCGAGGCAA
ATTGCCTGCC CTGTTTCTGA GGATATCGCG GCAAGAGTGT TAAGTTTGCC ATTATATGTA
GGGCTTCCTT ACGAGGACAT CGAAAGGATT TCCCGCATGA TCAACGGTCA TTTATCACCA
TAA
 
Protein sequence
MINVTKTFLP DQEEYLQYVR GIWERGYLTN NGPLLQQLEG QLKEYLNVDY LYFCGNGTIV 
LQIAIKALEL KGEIITTPFS YCATSNAILW ENCTPVFVDI DAATFNINAE LIEASITPAT
SAILATHVYG NPCDVEAIEA IAQKHNLKVI YDAAHAFGVT YKGKSLLSYG DLSTCSFHAT
KVFHTIEGGA LISNHPELDR KLHLLRAFGH QGDEHYEFAG INGKNSEFHA AMGLVNLPQV
PAIIQARKEV FEAYDSLLNW DILFKPTLSA DIEYNYAYYP VVFPSEAVMF RVMEALKVGE
IIPRRYFYPS LNTLSFMPRQ IACPVSEDIA ARVLSLPLYV GLPYEDIERI SRMINGHLSP