| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2758 |
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| Symbol | |
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| ID | 8226330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3410992 |
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| End bp | 3412731 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930587 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003087138 |
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| Protein GI | 255036517 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.435679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.479819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCG TCAACAAGGA CAAATTCGTT ATATACCAGA TATTTACACG ACTCTTCGGC
AACCGGAACA CGACCAACAA GGTGTACGGG ACGATCGAAG AGAACGGGTG CGGAAAATTC
AACGACATCG ACGATACCGC ACTGGCCGCA TTGAAGGATT TCGGCGTCAC GCACCTTTGG
TACACCGGCG TGCTCGAACA TGCCACGCTC ACCGATTATT CGCAATTCGG CATTAATCCC
GACCATCCGC TGATCGTAAA AGGCATTGCC GGCTCGCCTT ATGCCGTAAA AGATTATTAC
GATGTGGACC CCGACCTCGC CGTGGAGGTG CCAAACCGGA TGCAGGAGTT CGAAAACCTC
GTCGCGCGTA CGCATTCCCA CGATTTGAAA GTAATCATCG ACTTCATTCC GAACCATGTC
GCCCGGCAAT ACCAGTCCGA CGTCCGCCCC GAGGGCGTGC GGGATTTTGG TGAAGATGAC
GACGACACGG TTGATTTTAG CCCTTCCAAT AACTTTTATT ACATTCCAAA CCACGACTTT
GTGGTGCCCG AAGGCCACAA ACCGCCGCTG CCCGTGACAA CGCCCTACCA CGAGCGTCCC
GCCAAAGCCA CCGGCAACGA CGTGTTCCAG GCCCAGCCGA GCCAGTACGA CTGGTACGAA
ACCGTAAAAC TGAACTATGG CGTGGATTAC CTCAACGGCC GCGCATTGCA TTTCGACCCT
GTTCCTTCCA CCTGGCTCAA AATGCGAGAT ATCCTTATTT ACTGGACGCG CAAAGGCGTG
GACGGTTTCC GTTGCGACAT GGCCGAAATG GTGCCGGTGG AGTTCTGGGG CTGGGTAATC
CCGGAAGTGA AGCACGAAAA TCCTGCGGTG ATCTTCATCG CGGAGATCTA CAATCCATCC
GAATACCGGA ATTACATCGA GTCGGGCAAG TTTGATTACC TGTACGATAA GGTGGGGCTG
TATAATTCGC TGCGCCGGAT CGTGGAGGGG AATGGAACGG CGGAGGACAT TACGCGGGTA
TGGCAGCAGG AGTCGGGCGA TTTCAGCGAG CATATGCTGC GGTTTCTGGA AAATCACGAC
GAGCAGCGCA TTGCGTCGCG CTACTTTGCC GGGAACCCGT GGACGGCCCT GCCTGCGATG
GTATTGAGCG CCACACTGCA CACGGGGCCG GTAATGCTCT ATTTCGGACA GGAATTGGGC
GTGGACCCTA CCGAACAGGA AGGTTTCCAG GGTGAGGACG GCCGCACCAC CATTTTCGAT
TACTGGGGCG TTCCCGAGTT TCAGCAATGG GTGAATGGCG GCCGGTATGA TGACGCGCTG
CTCACGACCG AGCAGAAAAC GCTCCGCAGC TTTTACAAAG ATTTGAATGA ATTTGTATTG
AAAAACGAAG CCGTGTATGC CGGCGGATTC TATGACCTGC AATATGTGAA TGCTTATGGG
CAGTCTGCCA ACTACGACAA AACAATCATT TACAGCTATT TACGCCACAC AGCTAATCAA
AAATTGCTGT TTGTGTACAA CTTCCACGAA TCCCGCACCG TAGAAACGAC AATTAAAATA
CCGCAGGATG CCTGGGCCAA TGTGCTGAAA CTGGGCAAGA CCGGCTCGTA CAAACTTCGC
CCCGTGTTTC CCGTCGGAAT GGTGCAGGTG CAGCTTCGGA CGGCCGATAT TACTTCCACG
GGCGTGGGCA TCGAACTCCC ACCGATTTCC GCGTTTGTAT TCGAGATTGT GGCGAAGTAA
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| Protein sequence | MPAVNKDKFV IYQIFTRLFG NRNTTNKVYG TIEENGCGKF NDIDDTALAA LKDFGVTHLW
YTGVLEHATL TDYSQFGINP DHPLIVKGIA GSPYAVKDYY DVDPDLAVEV PNRMQEFENL
VARTHSHDLK VIIDFIPNHV ARQYQSDVRP EGVRDFGEDD DDTVDFSPSN NFYYIPNHDF
VVPEGHKPPL PVTTPYHERP AKATGNDVFQ AQPSQYDWYE TVKLNYGVDY LNGRALHFDP
VPSTWLKMRD ILIYWTRKGV DGFRCDMAEM VPVEFWGWVI PEVKHENPAV IFIAEIYNPS
EYRNYIESGK FDYLYDKVGL YNSLRRIVEG NGTAEDITRV WQQESGDFSE HMLRFLENHD
EQRIASRYFA GNPWTALPAM VLSATLHTGP VMLYFGQELG VDPTEQEGFQ GEDGRTTIFD
YWGVPEFQQW VNGGRYDDAL LTTEQKTLRS FYKDLNEFVL KNEAVYAGGF YDLQYVNAYG
QSANYDKTII YSYLRHTANQ KLLFVYNFHE SRTVETTIKI PQDAWANVLK LGKTGSYKLR
PVFPVGMVQV QLRTADITST GVGIELPPIS AFVFEIVAK
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