Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2735 |
Symbol | |
ID | 8226307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3383617 |
End bp | 3384288 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644930564 |
Product | ABC transporter related |
Protein accession | YP_003087115 |
Protein GI | 255036494 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.31749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.728727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTAC TTCGGGCGAG CGGGATCAGG CGTACTTACG GTTCATTGCA GGTATTGAAA GGCATTGATC TCGAAGTGAA AAAGGGGGAA GTAGTAGCCA TCGTCGGGCC GTCGGGAGCG GGTAAAAGTA CCTTTCTCCA CATCCTCGGA ACGCTCGACC GGCCGGAGCA GGGCGAAGTG TTCATCGACG GCATTAATGT CTTCACCCAA AAGGACAAAG ACCTCGCGCG TTTCCGTAAT GAAAAGATCG GCTTCATTTT CCAGTTCCAT AACCTCCTGG CGGAATTCAC CGCATTGGAA AACGTGTGTA TGCCGGGTTA TATCAACGGA AATGTGAATG AAAAGGACAT CCAGGCTCGT GCCAAAGAAC TGCTCGAACT GCTAGGGCTA GGCGGTCGGA TGGATCATTT GCCATCGGAG CTTTCCGGCG GTGAGCAGCA ACGCGTAGCC GTCGCCAGGG CATTGCTCAA CAAACCTGCC ATTGTATTAG CCGACGAACC CAGCGGCAAT CTGGATTCGC ATAATGCATT GGACTTGCAT CAGTTATTCT TCAAGCTGCG CGACGAGACG GGGCAGACGT TCATCATTGT GACCCATAAT GAAGAGCTGG CCGAAATGGC CGATCGTCGT TTGGTAATGC AGGACGGGTT GATGATTCAG CATTCGGTTT GA
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Protein sequence | MELLRASGIR RTYGSLQVLK GIDLEVKKGE VVAIVGPSGA GKSTFLHILG TLDRPEQGEV FIDGINVFTQ KDKDLARFRN EKIGFIFQFH NLLAEFTALE NVCMPGYING NVNEKDIQAR AKELLELLGL GGRMDHLPSE LSGGEQQRVA VARALLNKPA IVLADEPSGN LDSHNALDLH QLFFKLRDET GQTFIIVTHN EELAEMADRR LVMQDGLMIQ HSV
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