Gene Dfer_2735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2735 
Symbol 
ID8226307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3383617 
End bp3384288 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content52% 
IMG OID644930564 
ProductABC transporter related 
Protein accessionYP_003087115 
Protein GI255036494 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.31749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.728727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTAC TTCGGGCGAG CGGGATCAGG CGTACTTACG GTTCATTGCA GGTATTGAAA 
GGCATTGATC TCGAAGTGAA AAAGGGGGAA GTAGTAGCCA TCGTCGGGCC GTCGGGAGCG
GGTAAAAGTA CCTTTCTCCA CATCCTCGGA ACGCTCGACC GGCCGGAGCA GGGCGAAGTG
TTCATCGACG GCATTAATGT CTTCACCCAA AAGGACAAAG ACCTCGCGCG TTTCCGTAAT
GAAAAGATCG GCTTCATTTT CCAGTTCCAT AACCTCCTGG CGGAATTCAC CGCATTGGAA
AACGTGTGTA TGCCGGGTTA TATCAACGGA AATGTGAATG AAAAGGACAT CCAGGCTCGT
GCCAAAGAAC TGCTCGAACT GCTAGGGCTA GGCGGTCGGA TGGATCATTT GCCATCGGAG
CTTTCCGGCG GTGAGCAGCA ACGCGTAGCC GTCGCCAGGG CATTGCTCAA CAAACCTGCC
ATTGTATTAG CCGACGAACC CAGCGGCAAT CTGGATTCGC ATAATGCATT GGACTTGCAT
CAGTTATTCT TCAAGCTGCG CGACGAGACG GGGCAGACGT TCATCATTGT GACCCATAAT
GAAGAGCTGG CCGAAATGGC CGATCGTCGT TTGGTAATGC AGGACGGGTT GATGATTCAG
CATTCGGTTT GA
 
Protein sequence
MELLRASGIR RTYGSLQVLK GIDLEVKKGE VVAIVGPSGA GKSTFLHILG TLDRPEQGEV 
FIDGINVFTQ KDKDLARFRN EKIGFIFQFH NLLAEFTALE NVCMPGYING NVNEKDIQAR
AKELLELLGL GGRMDHLPSE LSGGEQQRVA VARALLNKPA IVLADEPSGN LDSHNALDLH
QLFFKLRDET GQTFIIVTHN EELAEMADRR LVMQDGLMIQ HSV