| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2734 |
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| Symbol | groEL |
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| ID | 8226306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3381625 |
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| End bp | 3383256 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644930563 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_003087114 |
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| Protein GI | 255036493 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.657251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAGA AAATATTTTT TGACACAGAA GCACGCGATA AAGTAAAACG CGGTGTGGAC
ACCCTGGCTG ACGCCGTTAA GGTTACATTG GGCCCACGTG GCCGTAACGT GGTAATCGAC
AAGAAATTCG GTTCTCCAAG CATCACAAAG GATGGTGTTA CTGTTGCCAA AGAAATCGAT
CTGAAAGATC CTATCGAAAA CATGGGAGCT CAGCTGGTGA AAGAAGTGGC CTCCAAAACT
GCTGATTCGG CAGGTGATGG TACTACTACT GCTACCGTTC TGGCACAGGC GATCTACTCG
ATCGGTGTAA AAAACGTAGC GGCTGGTGCT AACCCAATGG ATCTGAAACG CGGTATCGAC
AAAGCCGTTT CAGTGATCAC AAAGGATCTG GAAGCTCAGA AAAAGAATAT CTCTACTTCC
AAAGAAATCG CGCAGGTGGC AACTATCTCT GCTAACCATG ACGAGGAGAT CGGTAACATG
ATCGCCGAAG CGATGGAAAA AGTAGGTAAA GAAGGTGTTA TCACCGTTGA AGAGGCTCGC
GGAACTGAAA CAGAAGTTAA AACTGTGGAA GGTATGCAGT TCGACCGCGG TTACCTGTCT
CCATACTTCG TAACCAACAC TGAGAAAATG GAAGCTGAAC TGGAGCGTCC ATTCATCCTG
ATCTCTGAGA AGAAAGTATC TTCTATGAAA GAGCTTCTTC CTGTGTTGGA AGCAGTTGCG
CAAACCGGCC GTCCTTTGCT GATCCTTGCA GAAGACGTTG ACGGAGAGGC GCTTGCTACA
TTGGTAGTAA ACAAAATCCG CGGTGCATTG AAAGTAGCGG CTGTTAAAGC TCCTGGTTTC
GGTGACCGTC GTAAAGCAAT GCTGGAAGAT ATCGCGATCA TCACTGGCGG TACCGTTATC
AGCGAAGAGC GTGGTTTCAA ACTGGAAAAC GCTACTTTGG ACTACCTCGG TACTTGCGAA
AAAGCGATTA TCGACAAAGA CAACACAACT TTGGTAAACG GTAGCGGTGC ATCTGAAGAC
ATTCAGGCAC GTGTAAATCA AATCAAAGCG CAGATCGAAA ACACTACATC TGACTACGAT
CGCGAAAAAT TGCAGGAGCG TCTTGCCAAA TTGTCCGGCG GTGTAGCTAT CCTTTACATC
GGTGCTGCTA CTGAGGTTGA GATGAAAGAG AAAAAAGACC GCGTTGACGA TGCGCTTCAC
GCAACCCGCG CTGCGGTTGA AGAAGGTATC GTTGCAGGTG GTGGTGTAGC ATTCATCCGC
GCAACTGCTT CTCTCGACGA CCTGAAAGGT AACAACGACG ACGAAACAAC TGGTATCAAC
ATCATCCGTG CTGCTTTGGA AGCTCCATTG CGCACGATCG TGTCTAACGC CGGCGGCGAG
CCTTCAGTTG TGATCAATAA AGTGAAAGAT GGTTCAGGTG CTTTCGGTTA CAACGCGAAA
GACAACACTT ACCAAGACCT TCTTGAGGCT GGTATCATCG ATCCTAAGAA AGTATCTCGT
CTGGCACTCG AAAACGCAGC ATCTATCGCT GGTCTGTTGC TTACAACAGA ATGCGTAATC
GCTGACGAAC CAGAAGAAGC TCCTGCGGCA GGTGGCCACG GCCACGGCGG CGGAATGGGC
GGCATGATGT AA
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| Protein sequence | MSKKIFFDTE ARDKVKRGVD TLADAVKVTL GPRGRNVVID KKFGSPSITK DGVTVAKEID
LKDPIENMGA QLVKEVASKT ADSAGDGTTT ATVLAQAIYS IGVKNVAAGA NPMDLKRGID
KAVSVITKDL EAQKKNISTS KEIAQVATIS ANHDEEIGNM IAEAMEKVGK EGVITVEEAR
GTETEVKTVE GMQFDRGYLS PYFVTNTEKM EAELERPFIL ISEKKVSSMK ELLPVLEAVA
QTGRPLLILA EDVDGEALAT LVVNKIRGAL KVAAVKAPGF GDRRKAMLED IAIITGGTVI
SEERGFKLEN ATLDYLGTCE KAIIDKDNTT LVNGSGASED IQARVNQIKA QIENTTSDYD
REKLQERLAK LSGGVAILYI GAATEVEMKE KKDRVDDALH ATRAAVEEGI VAGGGVAFIR
ATASLDDLKG NNDDETTGIN IIRAALEAPL RTIVSNAGGE PSVVINKVKD GSGAFGYNAK
DNTYQDLLEA GIIDPKKVSR LALENAASIA GLLLTTECVI ADEPEEAPAA GGHGHGGGMG
GMM
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