Gene Dfer_2723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2723 
Symbol 
ID8226295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3370251 
End bp3371495 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content52% 
IMG OID644930552 
Productaminotransferase class I and II 
Protein accessionYP_003087103 
Protein GI255036482 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTC TAAAAAGCGA CCGCCTGAAT CATCTGAAAT ACGAGATCCG CGGGGCTACC 
TACCAGAAAG CGTTAGAGCT TGAAAGCCAG GGCTACAAAA TCCATAACCT GAACATCGGT
AACCCCGCAC CGTTCGGTTT CGATTCGCCC GACGAGATCG TCCACGACAT TATCATGAAC
ATCCGCAATG CGCAAGGCTA CTCGGATTCA CGTGGATTGT TCGCGGCGCG TAAGGCAATC
ATGCACTACA CGCAAACCAT TGGTATTCAA GATGTTGAAA TCAACGACAT TTTCATCGGA
AACGGCGTAA GCGAGCTGAT CCTGCTCTCG ATGCAAGCAT TGCTCAACCC CGGCGACGAA
ATACTGGTAC CCTCGCCCGA CTACCCGCTC TGGACCGCGG CTATCTCACT CAGCGGCGGC
ACACCGGTAC ATTATATTTG CGACGAACAA GCCGATTGGA ACCCCGATCT GGACGATCTG
GAAAAGAAAA TCACTTCGCG CACCAAGGGG ATTGTAATCA TTAATCCAAA CAACCCGACA
GGCGCCGTTT ACGACAAGGA AGTCCTCGCC CGCATTGCAC GCATTGCGGA AGAGCACGGG
TTGATCATCT TCTCCGACGA GATTTACGAC AAGATACTTT ATGACGGGGC CGTTCACCAT
CCAATGGGCT CGTTTGTGAA CGATACATTA TGCATTTCCT ACGGCGGATT GTCGAAAAAC
TACCGGTCGG CGGGCTTCCG CGGCGGGTGG ATGATCCTCA GCGGCGCTAA ACAGAAGGCC
AAATCCTATG CCGAAGGCCT GCTGCTGCTC GCGAGCATGC GCCTTTGCGC GAACGTGCCT
ACGCAATACG CGATCCAGAC GGCATTGGGC GGTTATCAAA GCATTAAAGA ACACGTGGTG
CCCGCCGGCC GGTTGTACAA GCAAATGAAT CTCGTTTATG ACAGGCTGAC GTCCATTCCA
GGCATCACCT GCGTGAAACC GAAGGGCTCC CTGTATGTTT TCCCAAAAAT CGACCTGAAA
AAATTCGGTT TTAAAGCTGA CGATCAGTTT GTGTACGAGC TGCTTTCCGA CCAGAAAGTG
CTCGTTGTGG CGGGAACGGG CTTCAATTAC CATCTGGACC CGCATTTCCG CATTGTGTTC
CTGCCGACGA TCGACGAGTT GAACCAGGCA ATGGACAAGC TGGAATTTTT CCTGACCAAC
CGACGCATCA TGTCCACGCG CACCGTTGAA GATATGATTG CGTAA
 
Protein sequence
MEFLKSDRLN HLKYEIRGAT YQKALELESQ GYKIHNLNIG NPAPFGFDSP DEIVHDIIMN 
IRNAQGYSDS RGLFAARKAI MHYTQTIGIQ DVEINDIFIG NGVSELILLS MQALLNPGDE
ILVPSPDYPL WTAAISLSGG TPVHYICDEQ ADWNPDLDDL EKKITSRTKG IVIINPNNPT
GAVYDKEVLA RIARIAEEHG LIIFSDEIYD KILYDGAVHH PMGSFVNDTL CISYGGLSKN
YRSAGFRGGW MILSGAKQKA KSYAEGLLLL ASMRLCANVP TQYAIQTALG GYQSIKEHVV
PAGRLYKQMN LVYDRLTSIP GITCVKPKGS LYVFPKIDLK KFGFKADDQF VYELLSDQKV
LVVAGTGFNY HLDPHFRIVF LPTIDELNQA MDKLEFFLTN RRIMSTRTVE DMIA