| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2721 |
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| Symbol | |
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| ID | 8226293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3365388 |
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| End bp | 3368606 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930550 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003087101 |
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| Protein GI | 255036480 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAC TACTACTCAC ACTCGGAGCC GGTATCATCG TGCTCTTCTT TACCCCTGCC
TATGCGCAAA CGCGCGAACT AACCGGCCAG GTCACGGCCG AAGACGGATC GGTGTTACCC
GGTGTCAATA TTTCGGTAAA AAACACGACC AAGGGCTCCA TTACCGACAA TAACGGCCGA
TACACCATCA ACGTAGAGCC TGGTAATATT CTCGTTTTCA GTTTCATTGG GTTTAAAAGC
AAGGACGCGC AGGTGGGGAA TCAAACCAGG CTGGACGTCG TCCTGACGAG CGATGAAACG
CAACTTCAGG AGATTGTCGT CACATCGCTG GGCATTGCCC GGGAGAAAAA AGCGCTGGGT
TATGCCGTTC AGGAAATTAA GGCCGACAAA CTCACACTCG CCCGCGACCC GAATATAGGC
AATGCACTCG CCGGGAAAAT TGCCGGTGTG CAGGTACTCG GCCAGTCGGC TGCAAAATTC
GGGACGCCTA CCATCCGGAT CAGGGGTATC AACTCGCTCG CAGGCAGCGA TCCGCTGTAC
GTTGTGGATG GTACGCCCAC GGATATCAGC ATGGTCAATA TGGATGACGT GGAATCGCTT
ACAGTCTTGA AAGGGCCCTC CGCGACGGCA TTGTACGGCA ACCGCGCATC AGCCGGTGTG
GTGGTGGTGA CGACCAAACG AGGAAAATCC GGCGAGACAT CCTTAAACTT CAACCATAGC
ATGACTATGG ACCAGGTTTC GCTGCTGCCC AGGTATCAGA ATGAGTACGG CGGAGGCTAT
TCTCAGGAAT GGGAAACCTT CAAATTCAAC CCGCAGATCC ACCCGGCCGC CTGGGCATCT
TATGAAGGCC AGCGCATCCT GGACTACTCG GCAGACGAGA GCTGGGGGCC GAAACTGGAC
GGCCAGATGC ACCGGTCCGC ATTTTCGTGG CAACCGGGCG AAGGGTTCGG GAAAGAAACC
CCATTCGTAG CACACCCGAA CAATGTGCGT GATTTCTTTG AAAAGCCGGT CAGCTATAAT
TCAAACATCG CTTTTTCAAA GGCCGGCGAC AGTTACTCGT CACGCATTTC CTACACGCAC
ATTGTCAACA ACGGCATTGT TCCGAACAGC CGGCAGCTTC GCGACTATAT CAGCGCAAAA
ACGTCGATCA GCTTTGCTAA AAAACTGACG GCGGAACTGA ACGTAAGTTA CACCGGAACC
AAAACCGACA ACGCCCCAGC CGACCGCTAT GGCAGCTCGG GCGGCACCGG TACGGGCACT
GCGCTTTTTA ACACCAATAA TGCCACATTG AACGGCTACA ATCAAACGAC GGGGTCATTT
AACCAATGGT TCCAGCGCCA GCTGGACATC AAAGACCTTC AAAACTATAA AAATCCCGAC
GGCACGTTCA GAAGCTGGAA CATCGGAAGC CCGACAGACG CCCGACCCAA ATACTGGGAC
AGCCCGTACA CGCAGGCGTA CGAAAACACG AACGTAAACC GCCAGCAACG CATTTTCGGC
GATGCAGGGC TTACCTATCA GGTTACCGAC TACCTGAAAA TCACCGGAAA AGTCCGCCGC
GACTATGGCA CCTTCTTCAT GGACGGCCGC GTTGCGTCAG GAACTTTGAA TGCTGGTGGA
TTGGGGGCTT ACGCCTACCT CAGCGGAGCC ATATCAGAAA ACAACTATGA AACCATTGCC
AGCTTCGGCA AGGACATTCA AAAGATATCG ATACTGATCA ATGCGGGGGG AAACATACGT
TACAACCGTA CCGAAGGCAC ATTGCAGGCC ACTGTCGGCG GCCTTACCAC ACCTGGCTAC
TATAATATTG CCGCCTCCAA AGACCGCCCT TTGACGGCAA ACTACCTTTT TGAGAAGCAA
GTAAACAGCG TATTTGCAAA CGCCAGCGTC GGCTACGGAG ACTTCCTTTT CATCGAAGGT
TCGATACGAA ACGACTGGTC ATCCACACTC CCGCCGTCGA GCAATAGCTA TCTGTACCCC
TCCGTTTCCA CCAGCCTCGT GTTTTCGGAG TTTATTCCGG CCAACCGCGT GCTGTCGTTC
GGAAAGCTGA GAGCCGGCTA TGCGCAGGTC GGCACCGATC TCGGCGCATA CCAAACCGCC
CTTAGTTATA ATGCCGGAAG CGTTTATGGT TCAAATCCTA CGATGACATT GCCCGGTATC
CTGCCCAATT CCAGCCTGAA ACCCGGCATG TCGTCGTCCT ACGAGGGAGG GATCGACCTG
CGGTTTTTCA GCAACCGCCT CGGACTCGAA TTCACAGCCT ACAACAACGA CAACAGCAAC
CAGATTATCC CGCTCGCCGT CGCTTCCACG AGCGGTTATA ACAATGCCGT CGTAAATGCT
GGAATGATCA CAACAAAGGG CCTGGAATTG CATATTTCGG CCCAACCGGT TAAAACCGGC
GAGTTCCTTT GGGAGCTGGA CATCAATGCA GACCGCAACG AATCGAAAGT GGTCAAGCTG
ACGGAGCAAA GCGACAATTA CCGCCTGGAC GGACCGCAGT GGCGCGCGTT AACGCTCAAT
GCACGCGAGG GGAAAGACTG GGGAATGCTG GAAGGCGTCG GCATCAAGCG AGACGAACAG
GGCAACAAGG TGGTCTATTC CCCGACGCCC GAAAACATTA AAGCGGGAAA AGCAGGTTTG
TACGTGAAGG AAAACAATGT GAACCTCGGC AATGTGTTAC CGAAATTCAA AGGCGGGTTG
ATCAATGCAT TTGAATACAA AGGGCTGACA TTGCAGCTGA GCACCGATTT CGTGGTAGGC
GGTAAGTTCT TTTCGGTAAC CCGCATGTTC AATGCCGGTT CCGGGTTAGC CGAGGAAACA
GCCGGCAACA ACGAGCTCGG CAAGCCTAAA CGCGACGATC CGGCGAATGG CGGCGGTGTG
TTGCTCGATG CGGTGACGGA AGACGGCCAA CCCAACACCT ACCGGGTAGA CACGCAAAAC
CTGTATGAAA ACTGGCTTTT CGCACTCAAT GAGCAATGGA TTTACGATAA AACCTACGTC
AAGCTCCGCG AAGTGTCGCT CGGCTATAAA ATCCCGAAAA GGCTTTTGGG CAGACATCTG
AAATCGGCTT CCGTATCGCT GATCGGCCGA AACCTCCTGC TGATGTACAG CGCAATCGGT
GGCGGAATCG ACATTTCAGA AACAGAAACG CTCTGGTACG AAGGTGGGCA GCTCCCGCCG
GTCAGGTCAG TCGGCGCCAC GCTCAGAGTA GGTTTTTAA
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| Protein sequence | MKQLLLTLGA GIIVLFFTPA YAQTRELTGQ VTAEDGSVLP GVNISVKNTT KGSITDNNGR
YTINVEPGNI LVFSFIGFKS KDAQVGNQTR LDVVLTSDET QLQEIVVTSL GIAREKKALG
YAVQEIKADK LTLARDPNIG NALAGKIAGV QVLGQSAAKF GTPTIRIRGI NSLAGSDPLY
VVDGTPTDIS MVNMDDVESL TVLKGPSATA LYGNRASAGV VVVTTKRGKS GETSLNFNHS
MTMDQVSLLP RYQNEYGGGY SQEWETFKFN PQIHPAAWAS YEGQRILDYS ADESWGPKLD
GQMHRSAFSW QPGEGFGKET PFVAHPNNVR DFFEKPVSYN SNIAFSKAGD SYSSRISYTH
IVNNGIVPNS RQLRDYISAK TSISFAKKLT AELNVSYTGT KTDNAPADRY GSSGGTGTGT
ALFNTNNATL NGYNQTTGSF NQWFQRQLDI KDLQNYKNPD GTFRSWNIGS PTDARPKYWD
SPYTQAYENT NVNRQQRIFG DAGLTYQVTD YLKITGKVRR DYGTFFMDGR VASGTLNAGG
LGAYAYLSGA ISENNYETIA SFGKDIQKIS ILINAGGNIR YNRTEGTLQA TVGGLTTPGY
YNIAASKDRP LTANYLFEKQ VNSVFANASV GYGDFLFIEG SIRNDWSSTL PPSSNSYLYP
SVSTSLVFSE FIPANRVLSF GKLRAGYAQV GTDLGAYQTA LSYNAGSVYG SNPTMTLPGI
LPNSSLKPGM SSSYEGGIDL RFFSNRLGLE FTAYNNDNSN QIIPLAVAST SGYNNAVVNA
GMITTKGLEL HISAQPVKTG EFLWELDINA DRNESKVVKL TEQSDNYRLD GPQWRALTLN
AREGKDWGML EGVGIKRDEQ GNKVVYSPTP ENIKAGKAGL YVKENNVNLG NVLPKFKGGL
INAFEYKGLT LQLSTDFVVG GKFFSVTRMF NAGSGLAEET AGNNELGKPK RDDPANGGGV
LLDAVTEDGQ PNTYRVDTQN LYENWLFALN EQWIYDKTYV KLREVSLGYK IPKRLLGRHL
KSASVSLIGR NLLLMYSAIG GGIDISETET LWYEGGQLPP VRSVGATLRV GF
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