| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2718 |
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| Symbol | |
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| ID | 8226290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3356471 |
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| End bp | 3359677 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644930547 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003087098 |
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| Protein GI | 255036477 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGA CTCTACTGTT TCTATTCTTA GGGTGCTTAT TGATTCCTGG CTGGCAGGCA
TTTGCCCAGG ATAAACAAGT ATCGGGAGTT GTTACCGCCG ACGACGGTAG CGTGCTCCCC
GGTGTAAACA TCACCCTGAA AGGTACGACC CGAGGTATCA CCACCGATAT CGACGGAAAG
TACACTATCT CGGCCCCCTC TTCCGGAACA TTGGTGTACT CGTTCGTGGG TTACATCAGC
CAGAGCATCG TGGTCGGCTC GAAATCGACG ATCAACGTAA CATTGGCGTC GGATGCCCAG
CAGCTGGGCG AGGTGGTCGT AACCGCGCTC GGTATTTCGC GTGAGCGTAA GTCGCTCGGT
TACAGCACCG CCACCATTTC AAACACATCC ATCACGGAAG CCCGTAACAC CAGCCCGCTC
GATGCGCTTA GTGCGCGCGT GCCCGGTCTG TCTGTAAACA CGGCGTCAGG AGCACCGGGT
GCGTCGACCG TCCTGAACAT CCGCGGTTTC AATTCCGTGA CCGGGAACAA CCAGCCGCTT
TACGTCATCG ACGGCGTGCC GATGAACAAC CGCGGTAACA CTTCATCAAC CAATGCGCAA
AACAGCAATG ATGATTTCAA CCGTTCGATG GACTTCGGTA ACCAGATGAA CGACATCAAC
CCTAACGAAA TTGAAAGCAT TACCGTACTG AAAGGCATTT CGGCATCCGC CTTATACGGT
AGCCGCGCAG CCAACGGTGC GATCCTGATT ACTACCAAAA GAGGAAAATC CGGTAAGACA
CAGGTTGACA TTTCATCGTC ATTTGCGCAA TCCCGAATAC TTCGCGTACC ACACCTGCAA
AATACGTACG GCCAAGGATG GAGCGGCATA TTCGATCGCC TCGAAAACGG TTCATGGGGA
CCGAAGCTCG ACGGCCAGCC ACGTGTATGG GGCAATGTGA TCGACAATGC ACAGATGTTG
AAATCGTTCT CGGCACAGGA AGACAATATC AAGGACTTCT TCGATAAAGG CTACGAATGG
AATAACAACA TTGCGGTATC TGGCGGTACC GAAACGGCTA ACTACCGCGT AGCTTATTCC
AACGCGACCG CGGATGGTGT TGTACCTACC AACGCGGACT CATACAAACG TAATACGCTG
AGCCTGAGTG GTGGTTTGAA GCTGGACAAG TTCTCGGTAA ATGCCAACAT CAACTATGTA
CACAAAAATC AGAAAGCGGT AGCTACCGGC CAGGGCGATG ATGCGGGAGG TGGTAAAGTG
CTGTGGCAAG AGCTGATCCA GATCCCGAGA GACCACTCGA TTGTGGACTC GAAAGCTATC
CTCGATCCGA GCAATCCGTT TTACAAATAC ATGACGTTGG ATACGTATTT TACACCATAC
GCCCAAAACC CTTACTGGAC GCTTTATAAC CAGGGTAACA ACTACGACGA AGACCGTATC
TATGGTAATC TGGAATTCAA CTATCAGATA CTGAAAGAGC TGAGTGCGAC ATGGAGGCTG
GGGGGCGACT ATTCGGACGC ATTTCAGAAA GACTGGGGTA ATGTAGGCCG GATTACGGAA
GGTTCACCGA ATTACGGTAT TGCCAACGAT GTATTTGGTG CCGTTTCACA ACTCGGGAGA
CAGAATCGCC AATTCAACAG CGATCTAATC TTAAATTATA AACACAATTT CGGATCAAGA
TTCGATGTAC AGGCTTTCCT TGGGCACAAC CTGAATGAAA GAACCGCACT TACCCACTTT
TCCAAAGTGA CCAACCTCGA TTTGCCGGGC TTTTACAGCC TGTCGAACAG CTCGGTGACA
CCGATTACTT TCGGCACAAC CAGCAAACGA CGCCTGGTAG GTGTATATGG TTCAGCGACA
TTTGGATTTG ATAACTGGTT ATACCTGACC GTAGGGGCAC GTAACGACTG GACAAGTACA
CTTCCAAAAG GCAAAAACTC GTATTTCTAT CCGAGCGCCA GCATTAGCGC GGTTCTGTCC
GATGTTTTCA AACTTCCTGC TGAAATCCCA TTCGTAAAAG TACGTTTTGC CGCCGCTTCC
GCGGGTAACG ACGCGGATCC TTACCAAATT TATTCTGTGT ATGTGCCGGG TGATGTGCGC
GCGGGTGGTT TCGGAAATAT TGTGTTCCCA TTCGGCGGGA TCAACGCCTA CGAAGTTTCC
AACAACCGTG GAAACGAGGC TTTGAAACCT GAAATTTCAA ACGAATATGA AGGAGGGCTT
GAACTGGGCT TTTTCGGAAG AAGGGTAGGG CTCGATCTGA GCTATTACAA TAAGCTGACC
AAGAACCAGA TCATCAGCCT GAGCCTGGAA CCGGCTACGG GTGTAACCAC GCAAACGGTT
AACCTGGGAA GCGTGCGCAA TAAAGGGTTA GAGCTGGCCC TTAACCTGGT GCCGGTGCGT
ACGGATAAAA TTGAATGGGG TGTTACTTTC AATTATAACA AGATCTGGAA TAAGGTCGAA
TCCCTGGGAT TGGAAGGCGG ATCGGGTAAT ATCCTGTTGA ACAGCAGCTA CAATGTGAAA
TTACGTGCCA AAGTAGGCGA GCCGCTGGGT TCAATCTACT CACCAGACAC ACGTCGTGAT
CCAAACGGAA ACATTATCGT AAACCCTGAA ACCGGTCTGC CGCTGGTAAG CTCCGAAGAA
ACATACCGGG GCTCGATCAA TCCGAATTAC ACGCTCGGCT TGTCGACCTA CCTGGATTTC
AAAGGTTTAA GGCTGAGTGC AAATGGTGAT TACCGTAATG GTGGTGTGTT CTACTCTTAC
ACAGCCCGCC TTAACTACTT CAATGGAAAC GCCTATAATA CGCAATATAA TGACAGAGAG
CCGTTTGTAG TTCCAGGCTC GGTGGTGGAG CATGATGGCG GTTTTATCCC TAACACGACG
CCGGTTTCAA GAGCCGATGT ATTCACCTAC TACGGAGGAC AAACGTCTGC CAACGAATTC
AATCATGTGC TGCCCAGGAC CTTCTTCAAG CTGAGAAACG TGTCGTTGAC TTACACCGTG
CCGAAAAAAT CATTGGAAAA ATTGCCCGTC CGCGGCGCGT CCATCGGTAT TTTCGGAAGG
AACCTGATCC TGTGGACGCC TAAGGCAAAC CATTATGTGG ATCCGGAAGC CAACACGTTT
GGTACCAGTC TGAAAAACCT CTACGGTGAA TTTGCCGCTG GTCCGTCTAC GGCTACTTAT
GGTGTCCAGT TAAATCTATC ATTCTAA
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| Protein sequence | MRKTLLFLFL GCLLIPGWQA FAQDKQVSGV VTADDGSVLP GVNITLKGTT RGITTDIDGK
YTISAPSSGT LVYSFVGYIS QSIVVGSKST INVTLASDAQ QLGEVVVTAL GISRERKSLG
YSTATISNTS ITEARNTSPL DALSARVPGL SVNTASGAPG ASTVLNIRGF NSVTGNNQPL
YVIDGVPMNN RGNTSSTNAQ NSNDDFNRSM DFGNQMNDIN PNEIESITVL KGISASALYG
SRAANGAILI TTKRGKSGKT QVDISSSFAQ SRILRVPHLQ NTYGQGWSGI FDRLENGSWG
PKLDGQPRVW GNVIDNAQML KSFSAQEDNI KDFFDKGYEW NNNIAVSGGT ETANYRVAYS
NATADGVVPT NADSYKRNTL SLSGGLKLDK FSVNANINYV HKNQKAVATG QGDDAGGGKV
LWQELIQIPR DHSIVDSKAI LDPSNPFYKY MTLDTYFTPY AQNPYWTLYN QGNNYDEDRI
YGNLEFNYQI LKELSATWRL GGDYSDAFQK DWGNVGRITE GSPNYGIAND VFGAVSQLGR
QNRQFNSDLI LNYKHNFGSR FDVQAFLGHN LNERTALTHF SKVTNLDLPG FYSLSNSSVT
PITFGTTSKR RLVGVYGSAT FGFDNWLYLT VGARNDWTST LPKGKNSYFY PSASISAVLS
DVFKLPAEIP FVKVRFAAAS AGNDADPYQI YSVYVPGDVR AGGFGNIVFP FGGINAYEVS
NNRGNEALKP EISNEYEGGL ELGFFGRRVG LDLSYYNKLT KNQIISLSLE PATGVTTQTV
NLGSVRNKGL ELALNLVPVR TDKIEWGVTF NYNKIWNKVE SLGLEGGSGN ILLNSSYNVK
LRAKVGEPLG SIYSPDTRRD PNGNIIVNPE TGLPLVSSEE TYRGSINPNY TLGLSTYLDF
KGLRLSANGD YRNGGVFYSY TARLNYFNGN AYNTQYNDRE PFVVPGSVVE HDGGFIPNTT
PVSRADVFTY YGGQTSANEF NHVLPRTFFK LRNVSLTYTV PKKSLEKLPV RGASIGIFGR
NLILWTPKAN HYVDPEANTF GTSLKNLYGE FAAGPSTATY GVQLNLSF
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