Gene Dfer_2706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2706 
Symbol 
ID8226278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3344426 
End bp3345382 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content52% 
IMG OID644930536 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_003087087 
Protein GI255036466 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCAG CGCTATTGAA TGAAGTACCG TCGCTCGATT TGGCCGATTT TACGTCGGGA 
GATGCCCGGC GCAAGCAGCA GTTTGTGGAA CACCTCGGCG AGGCATTTAC CAACATCGGT
TTTGTAGCCA TTAAGAATCA CGGATTAAGC GACGAACTCC GTAATGACCT CTACGACAGC
GTTCAGGAGT TTTTCTCACA GCCGGACGAT GTCAAGAGAA AATACGAATT CCCCGAATTG
TTCGGTCAGC GCGGCTACAT CGGTAAGGGC AAGGAAACGG CCAAGGGCTT TAAAGTGGCG
GATTTGAAAG AGTTTTACCA TGTAGGTCAG CCGGAGCCGG TCGGCCAGAT GCCTTCCAAT
ATTTTTCCCG AAGAATTTCC CGATTTCAAA AAATATACGC TCGAAGTGTA TCATACCTTC
GAAAGCACCG GCAAAACGCT GCTCCGCGCC ATTGCCATTT ACCTCGGATT GCCGGAAGAT
TATTTTGAAG ATAAGGTCAA AAACGGCGAC AGCCTGCTCC GGGCACTGCA TTACTTCCCC
ATCCCGAATC CAGAACTCGT GCCGGAAGGT GCCGTGAGGG CAGCTGCGCA CGGCGATATT
AACCTGATTA CATTATTGAT GGGTGCCAGC GCCGAGGGCC TCGAAGTGCT GCGCCGCGAC
GGCCAGTGGA TCGCCATTAC TGCCCTGCCC GACCAGATCG TCGTGAATGT GGGCGATATG
CTCGACCGAC TTACAAACCA CAAGCTCAAA TCGACCATTC ACCGCGTAGT GAATCCGCCG
CGCGAGAAAA TGGGCACATC GCGCTATTCA ATTCCCTTTT TCATGCACCC GCGCGCCGAT
ATGGACCTGA CCAGCTTGGA AAGCTGCATT ACTTCGGAAA ACCCGAAATT GTACACCGAC
ATGACTGCCG GGGAATTTCT CGATGAACGC TTGCGGGAGC TCGGTCTGAA AAAATAA
 
Protein sequence
MEPALLNEVP SLDLADFTSG DARRKQQFVE HLGEAFTNIG FVAIKNHGLS DELRNDLYDS 
VQEFFSQPDD VKRKYEFPEL FGQRGYIGKG KETAKGFKVA DLKEFYHVGQ PEPVGQMPSN
IFPEEFPDFK KYTLEVYHTF ESTGKTLLRA IAIYLGLPED YFEDKVKNGD SLLRALHYFP
IPNPELVPEG AVRAAAHGDI NLITLLMGAS AEGLEVLRRD GQWIAITALP DQIVVNVGDM
LDRLTNHKLK STIHRVVNPP REKMGTSRYS IPFFMHPRAD MDLTSLESCI TSENPKLYTD
MTAGEFLDER LRELGLKK