Gene Dfer_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2704 
Symbol 
ID8226276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3341729 
End bp3343105 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content51% 
IMG OID644930534 
Productpeptidase M16 domain protein 
Protein accessionYP_003087085 
Protein GI255036464 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TACTCATGCT AATCCTGGCC TTTTGCACAT TGACGGCAAA GGCCCAGAAT 
AATTTCAAAG TACCGCCTTA CGAGAAATTC AAACTGAAAA ACGGGCTGAC GGTTTACCTC
ATGGAGCAAC ACGAGGTGCC GCTGATCAAC GTCTCGGCCG TGTTCGATGC CGGCTCCATT
AACGACGGCG AGCGCTATGG CCTGGCCAGC CTCACTGCCG ACGCATTGCT TTTCGGCACG
CAGAAATATA CCAAAGCGCA GATCGAAGAA ATGACCGATT ATGTAGGCGC CAGCATGTCC
ACCTATGCTT CGAAGGACAA TGCGGGCTTA ACGGCCTCTT TTGCCGCGAA GGACCAGGAA
AAATTATTTG AACTGATCCA GCAAGTGCTG TTGTACCCCG TTTTTGATGC CACCGAATTC
GACAAGCACA AGCAACGCAC ATTGCTCGAA CTTGCCCAGG CGAAAGAAAG CCCGCGCACG
GTGATCGGCA ACTATTACAA TGCGCTTCTT TTCAACAACT TCCCTTACGC GACGCCCACG
ACGGGCAGCA AATCGACGGT CGAAAAGATC GATGTCGCCT CCGTGAAGGC ATTTTACCTA
AGCAATTACA CCACCGGAAA AGGAGCTATT GCGGTAGTAG GCGATTTCAA AGCGGCGGAC
ATGAAGAAAA AAGTAACCGC AATGTTTGGC GAATGGAAAA CCGCTCCGGC ACGGATGGTG
AAACGCGTGG CACCGAACCT GGAATTTGAG AAAAACAGGG TCTTGCTGGT GAACAAAGAA
GATGCCCGCG AAACGACTTT CATGATCGGC GGAAAGGGGA TCGACTATAA TTCACCTGAT
TACGTGCCTG TGGTGGTGAT TAACACCATT CTCGGCGGCC GGTTCACGTC CTGGCTCAAC
GATGCATTGC GCGTTAACTC GGGGCTTACC TACGGCGCAG TGAGCCGGTT TACCCGGTAC
AAATATGCAG GCACGTTTGG TATTTACACA TTTACCAAAA ACTCCACGAC GGTGCCGGCG
ATCGATATGG CGCTGAATGT GCTGGATAGT TTGCACAAAA ACGGCATTAA TGAAGAAATC
CTCGCGTCGG CGAAGGCCTA CGTCAAAGGC GATTTCCCGC CGGATTACGA GTCGGCCGGG
GCATTGGCGC GGCTGCTGAC CGATATGTTT ACCTACAATT TCGACGAGAG TTTCATCAAC
ACTTTCCAGG CCAAAGTGGA CGGACTGACG GTAGCGCAGG CAAAAGACAT TATTGCAACC
TATTTTCCCA AAGACAAGCT CCAATTCGTG CTCGTAGGCA AGGCGTCGGA GATCAGGGAC
CAGGTTAAAA AGTACGGCGA GATCAGCGAA AAAGAGATCA AGGCCGACGG GTTTTAG
 
Protein sequence
MKNILMLILA FCTLTAKAQN NFKVPPYEKF KLKNGLTVYL MEQHEVPLIN VSAVFDAGSI 
NDGERYGLAS LTADALLFGT QKYTKAQIEE MTDYVGASMS TYASKDNAGL TASFAAKDQE
KLFELIQQVL LYPVFDATEF DKHKQRTLLE LAQAKESPRT VIGNYYNALL FNNFPYATPT
TGSKSTVEKI DVASVKAFYL SNYTTGKGAI AVVGDFKAAD MKKKVTAMFG EWKTAPARMV
KRVAPNLEFE KNRVLLVNKE DARETTFMIG GKGIDYNSPD YVPVVVINTI LGGRFTSWLN
DALRVNSGLT YGAVSRFTRY KYAGTFGIYT FTKNSTTVPA IDMALNVLDS LHKNGINEEI
LASAKAYVKG DFPPDYESAG ALARLLTDMF TYNFDESFIN TFQAKVDGLT VAQAKDIIAT
YFPKDKLQFV LVGKASEIRD QVKKYGEISE KEIKADGF