Gene Dfer_2697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2697 
SymbolguaA 
ID8226269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3329318 
End bp3330847 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content52% 
IMG OID644930527 
ProductGMP synthase 
Protein accessionYP_003087078 
Protein GI255036457 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.421938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC AAATTCTGAT TTTAGATTTT GGCTCACAGT ACACCCAGTT AATTGCACGG 
AGAGTTCGCG AACTGAATGT TTATTGTGAA ATCCACCCAT ACAACAATTT CCCCGAACTC
ACTCCCAACG TCAAAGGTGT CATTCTCTCA GGAAGCCCCT GTTCTGTAAG GGACGAAGAT
TCTCCCCGGG TAGATCTCAA CAAATTTCGC AAAACATTGC CCCTGCTCGG CGTATGCTAT
GGCGCACAGT TGCTCGCACA GGAGCTGGGC GGCGATGTGA AACCTTCGCA GCACCGTGAA
TATGGCCGCG CGAAGCTGGA ACTCGGCGAT CCGGACTCGT CGCTGCTGGC AGGCTTGTCG
GAATCATCGC AGGTGTGGAT GTCGCATGGT GATACTATTA TGCGCGCGCC GCAGAATTTC
CACGTGATCG CTTCTACGGA GTCCGTGAAA GTGGCTGCAT TTAAAGTGGA GGACGAATTA
ACCTACGGTA TTCAGTTCCA CCCCGAGGTA ACGCACACAA CGGAAGGTAA AAAGCTGCTG
CACAATTTTG TAGTGAACAT TTGCGGTTGC AAGCAGGACT GGACTTCCGA GTCGTTCGTA
GAGCATACGA TCGAGCAGCT TCGCAAGAAA TTGGGTAACG ACAAGGTCGT AATGGCACTT
TCGGGTGGCG TAGATTCCAC GGTGGCTGCT ACGCTGGTAC ACCACGCGAT CGGTCAGAAT
TTGTATTGTA TTTTCGTAGA TAACGGTCTG CTGCGTAAGG ATGAGTTTGA GCAAGTGCTG
CATTCTTACC AGGACATGGG CCTCAATATC AAAGGTGTAG ATTCTAAATC ACACTTTTAC
CAGCAACTCG ACGGCCTGAG CGATCCGGAA GCGAAACGCA AGGCGATCGG CAAGTCGTTC
ATCGATATTT TCGATCAGGA AGCGCATTTG ATCGAGGACG TGAAATGGCT TGGACAGGGT
ACTATTTACC CCGACGTGAT CGAATCCGTT TCCGTCAAAG GACCTTCGGC GACCATCAAG
TCACACCACA ACGTGGGTGG TTTGCCCGAT TTCATGAAAC TGAAAGTCGT GGAGCCGCTG
AATACATTGT TTAAAGATGA AGTAAGGGCG GTTGGACGTA CACTGGGTAT CGACGAGAAG
ATCCTTAGCC GCCACCCGTT CCCGGGACCA GGCCTGGCGA TCCGCATTTT AGGAGACATT
ACGGAGGAAA AAGTAGCGAT TTTGCAGGAG GTAGACGCGA TATTTATCGG CGGCCTCCGC
AAATGGGACC TTTACAAAGA CGTTTGGCAG GCAGGCGCAA TGCTCCTTCC CGTGCAGAGC
GTGGGCGTAA TGGGCGACGA GCGCACGTAT GAGCGCGTGG TAGCCCTGCG CGCGGTAACT
TCGGTGGACG GTATGACCGC CGACTGGGCG CATTTGCCCT ATGATTTCCT CGCGGAAGTT
TCCAACGACA TTATCAACAA GGTGAAAGGG GTGAACAGGG TCGTTTACGA CATTTCTTCC
AAACCGCCTG CAACCATTGA ATGGGAATAA
 
Protein sequence
MTEQILILDF GSQYTQLIAR RVRELNVYCE IHPYNNFPEL TPNVKGVILS GSPCSVRDED 
SPRVDLNKFR KTLPLLGVCY GAQLLAQELG GDVKPSQHRE YGRAKLELGD PDSSLLAGLS
ESSQVWMSHG DTIMRAPQNF HVIASTESVK VAAFKVEDEL TYGIQFHPEV THTTEGKKLL
HNFVVNICGC KQDWTSESFV EHTIEQLRKK LGNDKVVMAL SGGVDSTVAA TLVHHAIGQN
LYCIFVDNGL LRKDEFEQVL HSYQDMGLNI KGVDSKSHFY QQLDGLSDPE AKRKAIGKSF
IDIFDQEAHL IEDVKWLGQG TIYPDVIESV SVKGPSATIK SHHNVGGLPD FMKLKVVEPL
NTLFKDEVRA VGRTLGIDEK ILSRHPFPGP GLAIRILGDI TEEKVAILQE VDAIFIGGLR
KWDLYKDVWQ AGAMLLPVQS VGVMGDERTY ERVVALRAVT SVDGMTADWA HLPYDFLAEV
SNDIINKVKG VNRVVYDISS KPPATIEWE