Gene Dfer_2696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2696 
Symbol 
ID8226268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3327036 
End bp3328895 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content51% 
IMG OID644930526 
ProductPeptidase M1 membrane alanine aminopeptidase 
Protein accessionYP_003087077 
Protein GI255036456 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.133709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA AATTATCAGT GCTTTTGCTG GTCGCGCTTG CGTTTCAGGT TTCAGCACAA 
AGTGACCGTT GGCAACAGCG CGCGAAGTAT CAGATGGAGA TCGACTTTGA CGCCGTCAAT
CATCGGTACA AAGGCATCCA AAAGCTCGTT TACACCAACA ATTCCCCGGA TACACTTCAA
AAGGTATTTT ACCATTTATA CCTCAATGCA TTCCAGCCCG GCAGTCAGAT GGACGTTCGT
TCGCGCTCGA TCAGCGACCC TGATCCGCGG GTGAAGGACC GTATTTCCAA GCTATCGCCT
TCCGAAATCG GTTATGAAAA GGTGCTTTCA TTGAAACAAA ATGGCAAAGC ACTCAAATAC
GAAGTGGTTG GGACTATCCT CGAAGTGACG CTGAACGAGA AGATTCTTCC AAAATCGCAG
CATACATTCG ATATGGAGTT TGAAGCGCAG GTACCGTTGC AAATCCGCCG CACAGGCCGG
GCCAATGCCG AGGGGATCGA CTATTCGATG GCGCAGTGGT ATCCCAAAAT GTCGGAATAC
GATTACGAAG GATGGCATGC GAACCCTTAC ATTGCCCGCG AATTTCATGG GATTTGGGGC
GACTTTGATG TGAAAATCAC CATGGACGCA GCCTACACGA TCGCGGGGAC TGGCTATTTG
CAGAATCCCG ATAAGATCGG CCACGGCTAT TCAACTAAAA ATGTATCCCA CAAACCGGGT
GACCGCCTTA CCTGGCATTT TGTTGCGCCG GAAGTGCACG ACTTCATGTG GGCCGCCGAC
CGCGATTATC AGCACGACGT TGTGAAAGTG GACGATAAGC TAGACCTGCA TTTCTTTTAC
CAAACCGACA CGCTGGCTAA TGTGTGGAAA CAAATGCAGC CACTGGCAGT GCGTGCTTTC
AAGATCATGA ATGAGCAGTT CGGGCGTTAT CCTTACAAGC AATACTCGGT GATCCAGGGC
GGCGACGGCG GTATGGAATA TCCGATGGCT ACGCTTATCA CCGGCCGCCT GAACCTCCAT
GCATTGACGA GCGTGACGGT GCATGAGTCA ATTCACAGCT GGTTCCAGGG CCTTTTGGCG
ACCAACGAAT CGAAATACCC CTGGATGGAC GAAGGCTTCA CGACTTATGC GCAAAATATC
GTGATGGCGG AGCTCTTCCC TGCCAAGGGC GACCCGCAGC GCAATTCGAC CAACAGCTAC
CGCGCGCTCG TTAAGTCGGG TGCGGAAGAG CCGCTTACGA CGCACGCCGA TCATTATAAT
ACCAACAAGG CATACAGCGT GGCGAGCTAC AACAAAGGGG CCGTTTTCCT GAACCAGCTC
AATTATATCA TGGGGAAGGA AGCATTCCAG CGCGGCATGA AGCGGTATTT CAATGAATGG
AAGTTCAAGC ATCCCAACCC GACGGATTTG AAGCGCATTA TGGAAAAGGA GTCGGGCCTG
GAACTCGACT GGTTTTGGGA GAATTTTGTA GGGACTACCA AAACGATCGA TTACAGCATC
CGCGAAGTAG TGGCTAATGC CGGTAAAACC GATGTGGTGC TGGAAAGAAT CGGCCAGATG
CCTATGCCGC TGGATGTAGT GGTGAGCTAC AAGGACGGCA CGCAGGAAAA TTTTTACATA
CCGCTTGAAA TCATGCGGGG TGAAAAGAAT GAAAAATGGT ATTCCAAAAC CACGCAATTG
GCCGATTGGG GCTGGACTTA CCCTGAGTAT TCCTTCACGA TAGACCGGAA TGTGGCCGAC
ATTCAAATGA TCGTAATCGA CCCAAGCCAG CGCCTGGCCG ACCTCGATCT CGACAATAAT
GTATGGCCGC CGACGGCTTC GAAAACCACG CCGCGTTTCA AGGCTGCGAA AGTGAAATAA
 
Protein sequence
MKFKLSVLLL VALAFQVSAQ SDRWQQRAKY QMEIDFDAVN HRYKGIQKLV YTNNSPDTLQ 
KVFYHLYLNA FQPGSQMDVR SRSISDPDPR VKDRISKLSP SEIGYEKVLS LKQNGKALKY
EVVGTILEVT LNEKILPKSQ HTFDMEFEAQ VPLQIRRTGR ANAEGIDYSM AQWYPKMSEY
DYEGWHANPY IAREFHGIWG DFDVKITMDA AYTIAGTGYL QNPDKIGHGY STKNVSHKPG
DRLTWHFVAP EVHDFMWAAD RDYQHDVVKV DDKLDLHFFY QTDTLANVWK QMQPLAVRAF
KIMNEQFGRY PYKQYSVIQG GDGGMEYPMA TLITGRLNLH ALTSVTVHES IHSWFQGLLA
TNESKYPWMD EGFTTYAQNI VMAELFPAKG DPQRNSTNSY RALVKSGAEE PLTTHADHYN
TNKAYSVASY NKGAVFLNQL NYIMGKEAFQ RGMKRYFNEW KFKHPNPTDL KRIMEKESGL
ELDWFWENFV GTTKTIDYSI REVVANAGKT DVVLERIGQM PMPLDVVVSY KDGTQENFYI
PLEIMRGEKN EKWYSKTTQL ADWGWTYPEY SFTIDRNVAD IQMIVIDPSQ RLADLDLDNN
VWPPTASKTT PRFKAAKVK