Gene Dfer_2684 details

Gene Information

• Locus tag: Dfer_2684
• ID: 8226256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dyadobacter fermentans DSM 18053
• Kingdom: Bacteria
• Replicon accession: NC_013037
• Strand: -
• Start bp: 3311117
• End bp: 3314575
• Gene Length: 3459 bp
• Protein Length: 1152 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644930515
• Product: PKD domain containing protein
• Protein accession: YP_003087066
• Protein GI: 255036445

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.386868
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAGAAAA CTCTACGGCT TCTCCTTATA TCGTTTCTGA TCCTCGTCCG CGCAGCCGAG 
CATTCACAGG CTGCTTCGGC CTACTTCATC GAGAACAAAG GCCAATGGGA CCCGGACATC 
CGTTTTCGGG CCGCTATTCC CGGTGGTTTC CTCTTTTTGA AACAGCATTC ATTGCTTTAC 
GTACTTTATG ATGCCGACAA GGTTTCCTCT TTGCACGCCA ACGGGAACGG CGGTGGACCT 
GCCGCACGTG CGGACATGAG CGCGCCGGGC GTTCGTGCGC ATGGGGTGGA AGTTTCTTTC 
CTCAATGCGT CGCCAACTGC CCATTGCAAG ACGGTTAATC AGAGTAAGGC ATCGTACAAC 
TATTTTCTCG GGAAAGATGA GACTACCTGG GCTGACGGAG CGAGGGGCTT TGAGGAGGTG 
ATTTACGAGG ACATTTATCC GGACATCGAC CTGCGCATTT ACCTGAACCA GGCGAAACTT 
AAATACGAAT TCATCGTCGG GCCAGGCGCG GATGCTTCCC GGATTCGCTT CCAGTACAAA 
GGCGCCGATG CGGTGACATT GAATGAATCG GGGCAGATTG TGATCAAGAC TTCGGTGGGG 
GACATCCGGG AGGCGCAGCC TTATTCCTTT CAGTCGGCCG ATGCGCGCAC GAAGGACGTA 
GCATCGGCAT TCCGGCTGTC CGCCGATCAT ACGGCGCATT TCGAATTACC GGACGGTTAT 
GACAAAACAT TGCCACTGAC CATTGACCCG GAACTGATTT TCTCTACTTA CTCGGGCGCG 
TCGTCGGATA ACTGGGGCCA TACCGCGACC TACGACGACG AGGGCAACCT CTACTCCGGC 
GGCACCGTGT TCGGAACCGA CTTCCCGGCC ACAACCGGTG CATTTCAGGT CAGATTTGAG 
GGATTGGTTG ATGTTTCTAT CCTGAAATTC AATCCCAGCG GCACCGACCT GCTCTACGCA 
ACTTTCCTGG GCGGTGACAA TACCGACCTT CCCACAAGCC TCATCGTCAA CAGCCGGAAA 
GAGCTGCTGA TATTGGGCAC AACTTCTTCA AAAGATTTCC CTGCCCGCAC CAATGCATTT 
CAACAGACAT TTGGCGGCGG AAGCAATATT GAGCCCATTT CAGGACTAAG ACTTGCCAAC 
GGCGGTGATT TGTTTGTGTC GAAATTGAAT GCAGCAGGCA GTCAGCTCAC CGGCTCGACA 
TTCATTGGCG GAAGCGGCAA CGACGGCGTC AGCATAACCG ACAATGTGAC GATACGGAAC 
TACGGGGATA GTTTCCGTGG CGAAATCGGG ATTGACAAGA ATGACAATGT ATATGTGGCC 
TCATCCACAA ATTCGATGAA TTTTCCGCTT AAAAATCCAG CCCAAAACAA GCTGGCTGGC 
GACCAGGATG GAGTCGTTTT CAAGTTGTCG GCGGGGCTGG ACCAGCTGTT ATGGTCAACT 
TATCTGGGCG GCGAAAAATG GGACGCTGCA TATTCGTTGA AAGTGACTGC CAGCGGCGAA 
GTGTATGTTG CCGGGATTAC TCAAAGCGGC AATTTGCAGA CTAAACCGGG CGCCTACCAG 
ACGGCGTTGA AAGGCACCGA AGATGGATTT GTAGCCCGTT TTGCCAATGA TCAGCTGTCG 
GCGCTCACAT ACCTGGGCAC CGACAAGGAG GATGGCGCTT ACCTGCTCGA TACGGATCAG 
GCCAATCAGG TGTACGTGTA CGGGCTAACG ATGGGGAGCT ATCCCGTGAG CCAGGGTGTT 
TATCAGAATG CCAAAAGCGG CCAGTTTGTG CATGCATTGA ATGCCTCATT GACCCAAAGC 
ATATTCTCGA CCATCATCGG CTCCGGCCGG GGCACGCCGG ATATTTCGCC TACGGCCTTT 
CTCGTGAGCG AATGCGGCAA TATTTACCTG GCGGGCTGGG GTGGAAATGT CAACACCAGC 
ACGGCCAACA ATCCTGCGAG CAGCACCACG GCGCTGCCCG TTACCGAGGA CGCCATGCAG 
CCTACCACGA ATGGCAATAA CTTTTACATC GCCATTCTCG AACAAGGTGC GAAGTCGCTG 
CTGTACGCGA CGTTTTTCGG AAGCCTGGCC CGCGACCAGC GCCTGCAAGG CGACCACGTT 
GACGGCGGAA CGAGCCGGTT CGATAAAAAC GGGATGATTT ACCACGCAAC CTGCGCATGC 
GGAGGCAGCC ATTTTCCCAC GACGCCCGAA GCGTGGTCGG AAACCAACAA CAGCGAGAAT 
TGCAATAATG CCGCATTCAA GATTGATATC GACCGTTTGA AAGCTGATTT CGATGTTTAT 
GCAGGGCAAA CGAAGGATGT TTTGAAAGGC TGCGCGCCGC TGGAACTTAC ATTTATGAAC 
ACCAGCGAGG GCGGTGTCGA TTACATCTGG GAGGTGAATG GCAACACGAT TTCCCGCGAC 
GGGGAGCAAT CGGAATATAC ATTTGCCAAA CCGGGAGAGT ATACGGTAAC ACTTACTGCC 
TATAACCGGC TGAGCTGCAA GCGAATGGAT GTTGCGCAGA AGAAGATCGT CGTCGAAACG 
CTCGTGACGA CTGTGACAGG TGATACAACG GTCTGTGAAA ATTCAGCCAT CAAACTGGGC 
GCAAGCGGAG GCACGCAATA CAAATGGTCT CCGGCAACCG GCCTCGATAA TGCGAATATT 
GCTACGCCTG TGGCCACCGT CAAAGAATCG ACCGAATATT CCGTTGAAAT CAGCAATGCA 
GTGGGTTGCA AGGTGACCGA GAAAGTTAAA ATTAACGTTG GTAAAAAGAC GGATTTCGTG 
GATATGCCCG ACACGGAGGT ATGCCTGGGC GCGACTGTCA CGCTGACCAT CTCCGGCAAT 
GCCCCGCAAT ATAAATGGCA CGCCACGACG GGCTTGCCAG AAACAATAGG CAGGTCGGTA 
ACCGTAAAAC CCACGCAAAC GACCACCTAC GTGATCGAAG GGCTTTATGA AGACGGCTGT 
CGCCCGCTGC GCGAAATTAC GGTGAATGTG GACCAGTCCT ACGCGCCGGA CTTCGATGTG 
GTGCAATCGG GCGGCGCCTG TAACGAGCCA TTTTCCTACT CGCTGACCAG CAAACATGGC 
AGAGCGCACC GTTACGAATG GAACATGGGC ACGGGCAACC CGGTGTCGGA CCCGGAAGTG 
AAAAACTACA TTTATGAAAT TCCGGGCGAA TATACGATCA CGCTCACGGC CTACAACGCG 
GCCGGCTGCT CACTGACGGC CTCCAAAAAG ATCAGCGCCG AGCCTGCATT CACACTCAGC 
AACGTGATCA CGCCGAATGG CGACGGCAAA AACGATTTCT TCATCGTGCC GGTAGCCTCC 
TCCTCGCTGG AAATCTTCAA CCGCTGGGGC AAATCAATCT TCAAATCCAC CGACTACAAG 
AACAACTGGG GCAAAGACAT CGCCAACGGC ACCTACCTTT ACGTAGTCGA CACACCGCAG 
GGTAATCACT GCAAAGGTTG GGTCGAAGTG TTGGAATGA 

 

Protein sequence

MQKTLRLLLI SFLILVRAAE HSQAASAYFI ENKGQWDPDI RFRAAIPGGF LFLKQHSLLY 
VLYDADKVSS LHANGNGGGP AARADMSAPG VRAHGVEVSF LNASPTAHCK TVNQSKASYN 
YFLGKDETTW ADGARGFEEV IYEDIYPDID LRIYLNQAKL KYEFIVGPGA DASRIRFQYK 
GADAVTLNES GQIVIKTSVG DIREAQPYSF QSADARTKDV ASAFRLSADH TAHFELPDGY 
DKTLPLTIDP ELIFSTYSGA SSDNWGHTAT YDDEGNLYSG GTVFGTDFPA TTGAFQVRFE 
GLVDVSILKF NPSGTDLLYA TFLGGDNTDL PTSLIVNSRK ELLILGTTSS KDFPARTNAF 
QQTFGGGSNI EPISGLRLAN GGDLFVSKLN AAGSQLTGST FIGGSGNDGV SITDNVTIRN 
YGDSFRGEIG IDKNDNVYVA SSTNSMNFPL KNPAQNKLAG DQDGVVFKLS AGLDQLLWST 
YLGGEKWDAA YSLKVTASGE VYVAGITQSG NLQTKPGAYQ TALKGTEDGF VARFANDQLS 
ALTYLGTDKE DGAYLLDTDQ ANQVYVYGLT MGSYPVSQGV YQNAKSGQFV HALNASLTQS 
IFSTIIGSGR GTPDISPTAF LVSECGNIYL AGWGGNVNTS TANNPASSTT ALPVTEDAMQ 
PTTNGNNFYI AILEQGAKSL LYATFFGSLA RDQRLQGDHV DGGTSRFDKN GMIYHATCAC 
GGSHFPTTPE AWSETNNSEN CNNAAFKIDI DRLKADFDVY AGQTKDVLKG CAPLELTFMN 
TSEGGVDYIW EVNGNTISRD GEQSEYTFAK PGEYTVTLTA YNRLSCKRMD VAQKKIVVET 
LVTTVTGDTT VCENSAIKLG ASGGTQYKWS PATGLDNANI ATPVATVKES TEYSVEISNA 
VGCKVTEKVK INVGKKTDFV DMPDTEVCLG ATVTLTISGN APQYKWHATT GLPETIGRSV 
TVKPTQTTTY VIEGLYEDGC RPLREITVNV DQSYAPDFDV VQSGGACNEP FSYSLTSKHG 
RAHRYEWNMG TGNPVSDPEV KNYIYEIPGE YTITLTAYNA AGCSLTASKK ISAEPAFTLS 
NVITPNGDGK NDFFIVPVAS SSLEIFNRWG KSIFKSTDYK NNWGKDIANG TYLYVVDTPQ 
GNHCKGWVEV LE