Gene Dfer_2681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2681 
Symbol 
ID8226253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3307078 
End bp3307971 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content55% 
IMG OID644930512 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_003087063 
Protein GI255036442 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.633218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCT GGATCGAAGC CGCACGCCCG AGAACACTTC CTCTTGCCTT GTCTTGTATT 
TTAATGGGCT GCTTCCTGGC CGCTGCTTCG GGACAATTCA GCTGGACGGT GGCGGGTTTG
AGCGTGCTGA CGACCATTCT TCTGCAAGTA CTTTCCAACT TTGCCAACGA CTACGGCGAT
GCCGTGAATG GCAAAGACAC CGAGCTACGT GAAGGGCCGC GCAGGGCAGT GCATTCGGGG
CACATTACGG CAGAGAAAAT GCTGCGTGCG ATTATCATTT TCTCGGTGCT CGCATTGATT
TCGGGCGTTG CCTTACTTAC GATCGCGCTG AAAGGAGCAC CTGCCAACAC TTTCTGGGTG
TTTCTGGGCA TCGGCATTGC GTGCATTATC GCGGCCATTA CCTACACGGC GGGCAAGCGG
CCGTACGGCT ACGTCGGCTT TGGCGACCTT TCTGTGCTGA TCTTTTTCGG CTGGGTGGGC
GTGCTCGGCA GCAACTTCCT ACACACGCAC GTGTGGGACT GGGGCCTGTT GCTTCCTGCA
ACTAGCTGCG GCCTATTCGC AGTAGGCGTG CTGAATATCA ACAATATCCG TGACATCGAC
TCCGACCGGG CTACCGGCAA AAACTCCATC CCCGTCCGCA TTGGCCGCGA AAAAGCCATC
GTGTACCACT GGTGCATTCT GCTGATCGGT ATGCTATGCG TAACGGTTTA CAGCGCCCAG
CACTTTTCGA GCTACGCCAG TCTGATTTTC TTTCTCAGCT TCCCACTTTT CGTCAAAAAC
GGTCTCGCAA TCTCACGCCT CACCAAAGCC AGCGAACTCG ACCCTTACCT GAAACAAATG
GCGCTCTCGA CGCTGCTTTT TGTGATTTTG TTCGGGATCG GGATTGTGAT CTGA
 
Protein sequence
MNPWIEAARP RTLPLALSCI LMGCFLAAAS GQFSWTVAGL SVLTTILLQV LSNFANDYGD 
AVNGKDTELR EGPRRAVHSG HITAEKMLRA IIIFSVLALI SGVALLTIAL KGAPANTFWV
FLGIGIACII AAITYTAGKR PYGYVGFGDL SVLIFFGWVG VLGSNFLHTH VWDWGLLLPA
TSCGLFAVGV LNINNIRDID SDRATGKNSI PVRIGREKAI VYHWCILLIG MLCVTVYSAQ
HFSSYASLIF FLSFPLFVKN GLAISRLTKA SELDPYLKQM ALSTLLFVIL FGIGIVI