| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2667 |
|---|
| Symbol | |
|---|
| ID | 8226239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3290097 |
|---|
| End bp | 3292406 |
|---|
| Gene Length | 2310 bp |
|---|
| Protein Length | 769 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644930498 |
|---|
| Product | oxidoreductase alpha (molybdopterin) subunit |
|---|
| Protein accession | YP_003087049 |
|---|
| Protein GI | 255036428 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01701] oxidoreductase alpha (molybdopterin) subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAA ATCCGATCCC AGGAGCCGAA AACCCGGAAA AACTGACCGG TTTAAAGAAA
GGCGAGATCA AAAAAGTAGC CGCAGGCATT CCGGCAGTAG TTTCCGCATT GGAAATGACC
GTCGGCGAGG CGGGTTTTCA GCGCGGCATG AAAGCGCTTC TCAATCTGAA CCAGAAAGGC
GGCTTCGACT GCCCAAGCTG CGCCTGGCCC GACCCGGATG ACGAGCGCTC GGGCATTGCC
GAGTATTGTG AAAACGGCGC CCGCGCAGTG GCCGAGGAAG CTACCGCCAA AAAACTCACG
GCGGAATTCT TCTCGCGGCA TTCCGTACAA GAACTCGGCA AACTATCCGA CTATGAGATC
GGCGGCAAAG GCCGCATTGC GGAGCCGATG TACCTGCCTG CCGGCGGCAC CCATTACCAG
CCCATTACCT GGGACGCCGC TTTTGCACGG ATCGGCACGG CGCTGAACAA GCTCGCGTCG
CCGGATGAGG CCGTGTTCTA CACGTCGGGC CGCACCAGCA ACGAAGCGGC ATTCCTGTAC
CAGCTTTTCG TGCGGGAATT CGGCACAAAC AACCTGCCCG ATTGCAGCAA TATGTGCCAC
GAAAGCAGCG GAACGGCATT GGGCGAATCA CTCGGGATCG GCAAAGGTTC GGTGACGCTC
AACGACTTTT ACCACGCCGA AGTGATCATG ATCCTCGGCC AGAACCCCGG CACCAACCAT
CCGCGGATGC TGACAGCGCT GCAAAAGGCC AAAGCCAACG GCGCGACGAT CATTTCCATT
AACCCGCTGC CCGAAACCGG CCTCATGGGA TTCAACAACC CGCAGCGCGT CGCCGGCGTA
CTGGGCCTCA ACTCCTCGCT CACGGATATT TTCCTGCAAG TGAAGATCAA TGGCGACATG
GCGTTGCTGA AAGCGATCAC GCTGCTCTTG CTGGAAGAGG AAGAAAAGAA CCCTGGTACT
GTGTTCGACC AGCAATTTAT CCAACAAAAC ACACAAGGCT GCGCCGAATA TCTGGAAGAC
CTGAAAGCGT ACAATGCGCA GCAACTCGCC GCAGAGGCAG GTGTGCCATT CGCGCAGGTG
CAGGAAGCCG CGCGTGTGCT TGCGGGGAAA AGCAAGGTTA TAGCCTGCTG GGCGATGGGG
CTTACGCAGC ATAAAAATGC CGTCGCGACC ATCAAAGAGA TCGTCAATTT ACTCTTGCTT
AAAGGCAGTA TCGGCAAGCC CGGTGCTGGC ACGTGTCCAG TTCGCGGGCA TAGCAATGTG
CAGGGCGACC GCACGATGGG TATTTTTGAG CGACCCACCG CGAAATTCCT GGATTCGATC
GAACGAAACT TCCATTTCGC GCCGCCGCGT GGACATGGCT ACGACGTTGT AGAATGCATT
AAAGCCATGC ATGCGGGCGA AGCTAAGGTG TTTTTTGCCC TGGGAGGCAA TTTCCTTTCG
GCAACGCCGG ATACCCGGTT TACCGCCGCG GCACTTCAAA AGTGCGAGCT CACCGTCCAC
GTTTCGACCA AACTCAACCG CAGCCACCTC GTGCACGGCC AGGAGGCATT GATATTGCCC
TGCCTCGGCC GGAGCGATAA GGATATGCGC GGCGATGAAA ACCGGTTTGT GTCGTGTGAA
AATTCAATGG GCGTGATCCA GTTATCCCGC GGCGTGCTCA CGCCGATTTC TGAGCATTTG
CTGAGCGAAC CGGAAATTGT GTGCAGGCTG GCCAAAGCCA CTTTGGGAAC ACGCAGCAAC
GTATCGTGGG ACAAATATGC GGCGGATTAC GACCTCATCC GCAACGATAT CGAACGCACC
ATTCCCGGTT TCGCCGATTA CAATGAGCGG GTAAGGCAGC CGGGAGGCTT TTATTTGCCC
AATTGCAACC GTTCCGGGGC GTTTGACACG CCGAGCGGCA AAGCGCATTT CCACATTGCC
GCCCCCGAAA CACCAGTTCT CAAACCGGGC GAGCTGATGA TGATGACCAT CCGCAGTCAC
GACCAGTTCA ACACCACCGT GTACGGCCTC AACGACCGCT ACCGCGGCAT TTACAACGAG
CGGCGCGTCA TTTTGATGAA TAGCAAGGAC ATACAGGAAC GCGGCCTGCA AAACGGCGAC
CTGGTGGATC TGCACAACCA TTTCGACGGC ATCGAGCGGG TAGCGCATCA ATTTGTGGTG
GTCGAATACC CGATTCCCGA GCAATGCACG GCGACCTATT TCCCCGAGAC CAATGTGCTG
GTGCCGATCA CGAGCGTGGC CGAGAAGAGC AACACGCCTA CTTCAAAAAT GGTAATCCTC
ACCGTGAAGC CGCATGGGGC ATTGGCATAA
|
|---|
| Protein sequence | MSENPIPGAE NPEKLTGLKK GEIKKVAAGI PAVVSALEMT VGEAGFQRGM KALLNLNQKG
GFDCPSCAWP DPDDERSGIA EYCENGARAV AEEATAKKLT AEFFSRHSVQ ELGKLSDYEI
GGKGRIAEPM YLPAGGTHYQ PITWDAAFAR IGTALNKLAS PDEAVFYTSG RTSNEAAFLY
QLFVREFGTN NLPDCSNMCH ESSGTALGES LGIGKGSVTL NDFYHAEVIM ILGQNPGTNH
PRMLTALQKA KANGATIISI NPLPETGLMG FNNPQRVAGV LGLNSSLTDI FLQVKINGDM
ALLKAITLLL LEEEEKNPGT VFDQQFIQQN TQGCAEYLED LKAYNAQQLA AEAGVPFAQV
QEAARVLAGK SKVIACWAMG LTQHKNAVAT IKEIVNLLLL KGSIGKPGAG TCPVRGHSNV
QGDRTMGIFE RPTAKFLDSI ERNFHFAPPR GHGYDVVECI KAMHAGEAKV FFALGGNFLS
ATPDTRFTAA ALQKCELTVH VSTKLNRSHL VHGQEALILP CLGRSDKDMR GDENRFVSCE
NSMGVIQLSR GVLTPISEHL LSEPEIVCRL AKATLGTRSN VSWDKYAADY DLIRNDIERT
IPGFADYNER VRQPGGFYLP NCNRSGAFDT PSGKAHFHIA APETPVLKPG ELMMMTIRSH
DQFNTTVYGL NDRYRGIYNE RRVILMNSKD IQERGLQNGD LVDLHNHFDG IERVAHQFVV
VEYPIPEQCT ATYFPETNVL VPITSVAEKS NTPTSKMVIL TVKPHGALA
|
|---|
| |