| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2662 |
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| Symbol | mnmA |
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| ID | 8226234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3286003 |
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| End bp | 3287109 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930493 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_003087044 |
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| Protein GI | 255036423 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAC ACGGACGCAT TCTCGTCGCC ATGAGCGGCG GCATCGACAG CTCGCTGGCA
GCTGTTCTTC TCCACGAACA AGGTTATGAG GTCATCGGTA TGACCATGAA AACCTGGGAT
TACGCCAGCA GCGGCGGTAC CAAGAAAGAA ACCGGATGCT GTTCGCTGGA TTCCATCAAC
GACGCACGTA ATATCGCGGT AGAGCTCGGT TTTCCGCATT ATATTCTCGA CATCCGCGCC
GAGTTTGGTG ACTACGTGAT CGACCATTTC ACAGGCGAGT ACCTGGAAGG CCGCACGCCG
AACCCCTGCG TGCTTTGTAA TACCCACATC AAATGGGACG CATTGCTCCG CCGCGCCGAC
CGGCTCGATT GCGAGTTTAT CGCTACCGGG CATTATGCCA ATATGCAGTT CAATAACGGC
CGCCATTATG TTTCCAAGGG GATAGATGCC TGGAAAGATC AAAGCTATGT GCTATGGGGT
GTGTCGCAGG AAAGCCTGGC GAGGACCAAA CTGCCGCTGG GGTATCTGCA TAAAGCGGAG
ATCCGCGAAA TGGCGCGTGA AAGAGGTTTT ATTGACCTCG TTAATAAATC TGAAAGCTAC
GAAATCTGTT TCGTGCCGGA TAACGACTAC CGCGGCTTCC TGAAAAGACG CATTCCCGGA
CTGGAAGCGG AAGTAGCAGG AGGTAACTTC GTTTACGCGG ACGGCACCAT TGTCGGCAAG
CATGAAGGCT ATCCGTTCTA CACCGTCGGC CAGCGCAAAG GCCTCGGCAT TGCATTAGGC
CGCCCGGTTT TCGTGACGGA AATAAGGAAA GATACCAACG AAGTTGTGCT CGGCGACATG
CCCGACCTTT TCCGCGACGG CATGAATGTG AGCAAATTGA ACCTTCAAAA ATACGCATCC
ATCGAAAAGC CGCTGGAAAC TATCACCAAA GTACGCTACA AACACGACGG CACCCCGGCG
CTCATCGAGC AAACCGGCCC CGACCAAATC GTAGCCCGCT TCCACGACGG CGTAAACGGC
ATCGCGCCGG GACAGGCAGC CGTGTTCTAT GAAGGCGACG ATGTTGTAGG CGGCGGCTGG
ATCATGAAGA GTTTTCGGCA GGAGTGA
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| Protein sequence | MSKHGRILVA MSGGIDSSLA AVLLHEQGYE VIGMTMKTWD YASSGGTKKE TGCCSLDSIN
DARNIAVELG FPHYILDIRA EFGDYVIDHF TGEYLEGRTP NPCVLCNTHI KWDALLRRAD
RLDCEFIATG HYANMQFNNG RHYVSKGIDA WKDQSYVLWG VSQESLARTK LPLGYLHKAE
IREMARERGF IDLVNKSESY EICFVPDNDY RGFLKRRIPG LEAEVAGGNF VYADGTIVGK
HEGYPFYTVG QRKGLGIALG RPVFVTEIRK DTNEVVLGDM PDLFRDGMNV SKLNLQKYAS
IEKPLETITK VRYKHDGTPA LIEQTGPDQI VARFHDGVNG IAPGQAAVFY EGDDVVGGGW
IMKSFRQE
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