Gene Dfer_2655 details

Gene Information

• Locus tag: Dfer_2655
• ID: 8226227
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dyadobacter fermentans DSM 18053
• Kingdom: Bacteria
• Replicon accession: NC_013037
• Strand: +
• Start bp: 3275533
• End bp: 3279057
• Gene Length: 3525 bp
• Protein Length: 1174 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 644930486
• Product: Spore coat protein CotH
• Protein accession: YP_003087037
• Protein GI: 255036416

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 38
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTTCCA ATTCCAGCTC CTATTTGGAT GAAACCGGTT CGGACGAGGA CTGGATCGAG 
CTTTACAATG CCGGCGCTAC GCCCGTGGAT TTGAGCGGTT ATTATCTTAC CGACGACGCA 
GGCGAGTTGA AAAAATTCCA GTTACCATCC AGCAGCGGTG CACTAACCAT CCAGCCCGGC 
GGCTTCCTGA TCCTCTGGGC GAGCGGTTTG CCGTCGCGCG GGCCGAAACA CCTCGGCTTC 
GGGCTTAGTG GCGACGGAGA GCAGCTGCTA CTGGTCGCAC CGAACGAGAC GATCATCGAC 
CAGCTCGATT TCCCGAAACA GCGAACGGAC ATTTCCTATG GGCGCAAAAC GAACGGTTCT 
TCCGAAATCG TGTATTTCTC TCCCTCCTCG CCCAACGCCG GCAATATGGC GGCCAACTCC 
TACACGGGTT TCGCGTCGCC GCCGGTGATG AGCGTGGAAA GCGGCTTTTT CCAAAACAGC 
TTCACGCTCA CGATTTCCAC CGCTGTGCCG GGTGCAGAAG TGTATTACAC CACCGACGGC 
TCCCAGCCCG ACAAAAACAA TATCACAGCG CCGGGCAAGG CTTATCAATT CAAAAACCAA 
TACCCGAAAA ACCCCGGAGA TGGCATAGGG TCCACCTTTA CCAATCACTT TCTTACGCTG 
AAACAGAATT CGCCCGTCAA CATCCCGATA ACCGACAAAT CGGGGCAGCC TGACGTCCTT 
GCGGCCATTT CGGCTACCAA CGATTTTATC CCTACCTATA ATTCGGTGCC GGTGAAGCCG 
GTTTACAAAG GGATGGTCAT CCGCGCAAAG GTTTATGAGG CCGGAAAACT GCCCAGCGAA 
ACGGAATCCC GGACGTATCT TTTCACAACC GATGGCCAGC CTAAATCGCA GCTAGCGGTA 
TTCTCCATCA AAACCGACCC GGACGATATG TTCGATTATG AGGACGGGAT CGGGGTTGCG 
GGGAAAGATT TTGTGGATTG GCGTAATGCG AATCCGGGCG CCGGGTCGTT TGGGGCGCCG 
GTGGGAAACT ATTACCGCAA CACGGAAATT CCCTCGAATG TGGAAGTGCT GATCAACGGC 
AGTCCGGTCA TTAACCAGGA CCTTGGCCTG CGCATTCACG GCCAGGGGTC GAGGACCAGC 
GACAAGAAGA GTTTCCGGCT GTACTCCACC GGCCCGAATG CTTCCCAAAG CGATATCGAC 
TACCCGCTTT TTCCGTCACT TCCTTTTCAC ACATTCAGGA GGCTGATCAT GCGGAATTCC 
GGCAATGATT ACGAGCGGAC GCTCATGAAG GACTCTTACA TTCATCAGAT CGCGAAAGGG 
CTCGACATTG AATTGCAGGA ATACCGTCCC GTCACAACCT ACCTCAATGG CGAATACTGG 
GGCATTCACG ACCTGCGCGA ACGCCAGGAT GAATACTATT TTGCCAGCCA TTACGCGCTC 
GAACCCGAAA ACATCGAGTT TTTCGCCGAC CCCGAGATTG AAAACAATTC TGGGCATTAC 
GCGGACCTTT CCAATTTCAT CAAAACCCAC AACATGGCCG ACGCCGGCAA TTATGACTAC 
GCGTTGGCGC GAATGGACAT CGACAATTTC ATCGACTACT GCATTCTCGA ACTTTATGCT 
GCGAACTGGG ACTGGCCTTA TGGGAATGTT ACCTATTGGC GGCACAAGGT GCCGTACAGC 
CCGGCAGGCG GCAAGGGAAA GGATGGCCGC TGGCGCTGGG CACTTTTCGA TGTCGATCTG 
AGCTTTGAAG AGCTGGATGC CAACCAGTTT CCCAAGGCAT TGGGCGCCCC CGATTTCCTG 
CTGCAATATC TTTTGCCCAA TACAACTTTC AGGAACAAGT TTATCAACCG TTATGCGGAC 
CTGATCAACA GCCATTTTCA GCCTCAGCGC CTGCTGGATC AGATTAATGT TTGTAAAAAC 
CTGATTGCGA ATGAGATGCC GGAAAACATC AAACGCTGGA ACCGCCCGGC GAGCATGGCT 
ACCTGGGAGT CGAATGTTAA CCTGATGGTC AATTTCGCTA CCAACCGGCC CAATGTGGCC 
CGGGGGCATA TTCAAGGACA ATTCAATCTT AGCGCAGGCA CACAGCAGAT CTCCGTTCAT 
GTTTCCAATC AGGACCACGG CTATGTGCGC GTGAATACGA TCGACATTCT TCCGAGTACC 
CTCGGCGTTT CTGCGAATCC TTATCCATGG AATGGCATTT ATTTCAAAAA CGTGAACATT 
TCCCTTACGG CGATCGCCAA ACCGGGCTAT AAGTTTTTGC AATGGGAAAA CCTGACTACC 
AATGCTATTT CGCACAGCGC CACCATTGGA TTTGCGCCAT CCTCTTCGTC CAACTATCGT 
GCGGTGTTCG CAGTAGATGT CGCCCCGGCA CAAGTGCCCG CGCCGCTCGA CCCCAGCGCA 
TGTGCGTACG ATTTCAATGC GTGGCTGGCT ACTGCGGCCG GGAATACCTT TCCGGACAAT 
ATGCGGTTTG TATATATGGA AAACGACGAC CCGGACCTTA ATTCGCCCGT CGTCGGATTT 
ACCAGCGGGG TTTATAACCT CACGAGCCGC ACGCGCATCA ACGGCCTAGG CGACCAGGGC 
ATTTCGTTTA TCAACACCGG CAATGCAGCG GGTAACCCGG GCTATCCGGG CATGAAGCTC 
GGCGGCGCCA TTCTGGCATT GAATACCATC GGCAAGACCG TCGCGAGTGT GAAATGGACG 
GGCGGGACGG TCACGCCCAA TGCAAGGCCT TACGCGATCC GGCTGCAATA CCGCCTTTCG 
GAAACGGGGC CATTTACCGA CGTGCTGAAC CCTAATAACC AGCCGGTGGA ATATGTCCGG 
TCGGCCACGG CGGGGCACGA GCAGGTGATC GATTGGGTGG CGCTCCCGGC CGAAGTCCTC 
AACAAACCTT ACGTGCAGCT GCTATGGCGG TATTATTGTA CGGACGCCAC TTTGACGGGC 
GCGCGGGACG AACTGCGCCT GGACGATATT ATGGTGCAAA CCTGCTCCGA CCCGCTGCCG 
GTGACGCTCG TTAGTTTTAA TGCAACCACA GTGGAAGAAA AAGTACTGGT AACCTGGGCA 
ACGACCGAAG AAAGGGACCA CGACCATTTC GAGGTGCAGC GGTCGCACGA CGCCCGCAGC 
TGGGCGGCCC TGGGACGCAT TTCGGGAAAG GGAAGCGTGA ATAGTTTCAA CCAATACCGC 
TTTGAAGACC CATGGCCGTT ATCCGGAACA AGTTATTATA GGTTAAAACA GGTCGATACC 
GACCAAACCT ATGCGTTTTC CCACGTAGTA ACCGTGCAAC GGCCCGGGTT TGCTGCGAGC 
GTTTTTCCGA ATCCGGCAGA CCACATATTG TACTTGAAAA TACCCGTTCA GAAAGGCGGG 
TCGAGCTACA CTGTTATGGA TGTTTCGGGG AACGTGCGGC TGCGCGGCTA TGTAATGACT 
GGCCGGTCGT CGATTCCGAT CGGAAGCTTA TTACCGGGCT TTTATATCAT GAAAATCCTG 
AATGATGACG GGACATCCGC TTTGTTGAAG TTTGTCAAAA AGTGA 

 

Protein sequence

MASNSSSYLD ETGSDEDWIE LYNAGATPVD LSGYYLTDDA GELKKFQLPS SSGALTIQPG 
GFLILWASGL PSRGPKHLGF GLSGDGEQLL LVAPNETIID QLDFPKQRTD ISYGRKTNGS 
SEIVYFSPSS PNAGNMAANS YTGFASPPVM SVESGFFQNS FTLTISTAVP GAEVYYTTDG 
SQPDKNNITA PGKAYQFKNQ YPKNPGDGIG STFTNHFLTL KQNSPVNIPI TDKSGQPDVL 
AAISATNDFI PTYNSVPVKP VYKGMVIRAK VYEAGKLPSE TESRTYLFTT DGQPKSQLAV 
FSIKTDPDDM FDYEDGIGVA GKDFVDWRNA NPGAGSFGAP VGNYYRNTEI PSNVEVLING 
SPVINQDLGL RIHGQGSRTS DKKSFRLYST GPNASQSDID YPLFPSLPFH TFRRLIMRNS 
GNDYERTLMK DSYIHQIAKG LDIELQEYRP VTTYLNGEYW GIHDLRERQD EYYFASHYAL 
EPENIEFFAD PEIENNSGHY ADLSNFIKTH NMADAGNYDY ALARMDIDNF IDYCILELYA 
ANWDWPYGNV TYWRHKVPYS PAGGKGKDGR WRWALFDVDL SFEELDANQF PKALGAPDFL 
LQYLLPNTTF RNKFINRYAD LINSHFQPQR LLDQINVCKN LIANEMPENI KRWNRPASMA 
TWESNVNLMV NFATNRPNVA RGHIQGQFNL SAGTQQISVH VSNQDHGYVR VNTIDILPST 
LGVSANPYPW NGIYFKNVNI SLTAIAKPGY KFLQWENLTT NAISHSATIG FAPSSSSNYR 
AVFAVDVAPA QVPAPLDPSA CAYDFNAWLA TAAGNTFPDN MRFVYMENDD PDLNSPVVGF 
TSGVYNLTSR TRINGLGDQG ISFINTGNAA GNPGYPGMKL GGAILALNTI GKTVASVKWT 
GGTVTPNARP YAIRLQYRLS ETGPFTDVLN PNNQPVEYVR SATAGHEQVI DWVALPAEVL 
NKPYVQLLWR YYCTDATLTG ARDELRLDDI MVQTCSDPLP VTLVSFNATT VEEKVLVTWA 
TTEERDHDHF EVQRSHDARS WAALGRISGK GSVNSFNQYR FEDPWPLSGT SYYRLKQVDT 
DQTYAFSHVV TVQRPGFAAS VFPNPADHIL YLKIPVQKGG SSYTVMDVSG NVRLRGYVMT 
GRSSIPIGSL LPGFYIMKIL NDDGTSALLK FVKK