Gene Dfer_2655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2655 
Symbol 
ID8226227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3275533 
End bp3279057 
Gene Length3525 bp 
Protein Length1174 aa 
Translation table11 
GC content54% 
IMG OID644930486 
ProductSpore coat protein CotH 
Protein accessionYP_003087037 
Protein GI255036416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA ATTCCAGCTC CTATTTGGAT GAAACCGGTT CGGACGAGGA CTGGATCGAG 
CTTTACAATG CCGGCGCTAC GCCCGTGGAT TTGAGCGGTT ATTATCTTAC CGACGACGCA
GGCGAGTTGA AAAAATTCCA GTTACCATCC AGCAGCGGTG CACTAACCAT CCAGCCCGGC
GGCTTCCTGA TCCTCTGGGC GAGCGGTTTG CCGTCGCGCG GGCCGAAACA CCTCGGCTTC
GGGCTTAGTG GCGACGGAGA GCAGCTGCTA CTGGTCGCAC CGAACGAGAC GATCATCGAC
CAGCTCGATT TCCCGAAACA GCGAACGGAC ATTTCCTATG GGCGCAAAAC GAACGGTTCT
TCCGAAATCG TGTATTTCTC TCCCTCCTCG CCCAACGCCG GCAATATGGC GGCCAACTCC
TACACGGGTT TCGCGTCGCC GCCGGTGATG AGCGTGGAAA GCGGCTTTTT CCAAAACAGC
TTCACGCTCA CGATTTCCAC CGCTGTGCCG GGTGCAGAAG TGTATTACAC CACCGACGGC
TCCCAGCCCG ACAAAAACAA TATCACAGCG CCGGGCAAGG CTTATCAATT CAAAAACCAA
TACCCGAAAA ACCCCGGAGA TGGCATAGGG TCCACCTTTA CCAATCACTT TCTTACGCTG
AAACAGAATT CGCCCGTCAA CATCCCGATA ACCGACAAAT CGGGGCAGCC TGACGTCCTT
GCGGCCATTT CGGCTACCAA CGATTTTATC CCTACCTATA ATTCGGTGCC GGTGAAGCCG
GTTTACAAAG GGATGGTCAT CCGCGCAAAG GTTTATGAGG CCGGAAAACT GCCCAGCGAA
ACGGAATCCC GGACGTATCT TTTCACAACC GATGGCCAGC CTAAATCGCA GCTAGCGGTA
TTCTCCATCA AAACCGACCC GGACGATATG TTCGATTATG AGGACGGGAT CGGGGTTGCG
GGGAAAGATT TTGTGGATTG GCGTAATGCG AATCCGGGCG CCGGGTCGTT TGGGGCGCCG
GTGGGAAACT ATTACCGCAA CACGGAAATT CCCTCGAATG TGGAAGTGCT GATCAACGGC
AGTCCGGTCA TTAACCAGGA CCTTGGCCTG CGCATTCACG GCCAGGGGTC GAGGACCAGC
GACAAGAAGA GTTTCCGGCT GTACTCCACC GGCCCGAATG CTTCCCAAAG CGATATCGAC
TACCCGCTTT TTCCGTCACT TCCTTTTCAC ACATTCAGGA GGCTGATCAT GCGGAATTCC
GGCAATGATT ACGAGCGGAC GCTCATGAAG GACTCTTACA TTCATCAGAT CGCGAAAGGG
CTCGACATTG AATTGCAGGA ATACCGTCCC GTCACAACCT ACCTCAATGG CGAATACTGG
GGCATTCACG ACCTGCGCGA ACGCCAGGAT GAATACTATT TTGCCAGCCA TTACGCGCTC
GAACCCGAAA ACATCGAGTT TTTCGCCGAC CCCGAGATTG AAAACAATTC TGGGCATTAC
GCGGACCTTT CCAATTTCAT CAAAACCCAC AACATGGCCG ACGCCGGCAA TTATGACTAC
GCGTTGGCGC GAATGGACAT CGACAATTTC ATCGACTACT GCATTCTCGA ACTTTATGCT
GCGAACTGGG ACTGGCCTTA TGGGAATGTT ACCTATTGGC GGCACAAGGT GCCGTACAGC
CCGGCAGGCG GCAAGGGAAA GGATGGCCGC TGGCGCTGGG CACTTTTCGA TGTCGATCTG
AGCTTTGAAG AGCTGGATGC CAACCAGTTT CCCAAGGCAT TGGGCGCCCC CGATTTCCTG
CTGCAATATC TTTTGCCCAA TACAACTTTC AGGAACAAGT TTATCAACCG TTATGCGGAC
CTGATCAACA GCCATTTTCA GCCTCAGCGC CTGCTGGATC AGATTAATGT TTGTAAAAAC
CTGATTGCGA ATGAGATGCC GGAAAACATC AAACGCTGGA ACCGCCCGGC GAGCATGGCT
ACCTGGGAGT CGAATGTTAA CCTGATGGTC AATTTCGCTA CCAACCGGCC CAATGTGGCC
CGGGGGCATA TTCAAGGACA ATTCAATCTT AGCGCAGGCA CACAGCAGAT CTCCGTTCAT
GTTTCCAATC AGGACCACGG CTATGTGCGC GTGAATACGA TCGACATTCT TCCGAGTACC
CTCGGCGTTT CTGCGAATCC TTATCCATGG AATGGCATTT ATTTCAAAAA CGTGAACATT
TCCCTTACGG CGATCGCCAA ACCGGGCTAT AAGTTTTTGC AATGGGAAAA CCTGACTACC
AATGCTATTT CGCACAGCGC CACCATTGGA TTTGCGCCAT CCTCTTCGTC CAACTATCGT
GCGGTGTTCG CAGTAGATGT CGCCCCGGCA CAAGTGCCCG CGCCGCTCGA CCCCAGCGCA
TGTGCGTACG ATTTCAATGC GTGGCTGGCT ACTGCGGCCG GGAATACCTT TCCGGACAAT
ATGCGGTTTG TATATATGGA AAACGACGAC CCGGACCTTA ATTCGCCCGT CGTCGGATTT
ACCAGCGGGG TTTATAACCT CACGAGCCGC ACGCGCATCA ACGGCCTAGG CGACCAGGGC
ATTTCGTTTA TCAACACCGG CAATGCAGCG GGTAACCCGG GCTATCCGGG CATGAAGCTC
GGCGGCGCCA TTCTGGCATT GAATACCATC GGCAAGACCG TCGCGAGTGT GAAATGGACG
GGCGGGACGG TCACGCCCAA TGCAAGGCCT TACGCGATCC GGCTGCAATA CCGCCTTTCG
GAAACGGGGC CATTTACCGA CGTGCTGAAC CCTAATAACC AGCCGGTGGA ATATGTCCGG
TCGGCCACGG CGGGGCACGA GCAGGTGATC GATTGGGTGG CGCTCCCGGC CGAAGTCCTC
AACAAACCTT ACGTGCAGCT GCTATGGCGG TATTATTGTA CGGACGCCAC TTTGACGGGC
GCGCGGGACG AACTGCGCCT GGACGATATT ATGGTGCAAA CCTGCTCCGA CCCGCTGCCG
GTGACGCTCG TTAGTTTTAA TGCAACCACA GTGGAAGAAA AAGTACTGGT AACCTGGGCA
ACGACCGAAG AAAGGGACCA CGACCATTTC GAGGTGCAGC GGTCGCACGA CGCCCGCAGC
TGGGCGGCCC TGGGACGCAT TTCGGGAAAG GGAAGCGTGA ATAGTTTCAA CCAATACCGC
TTTGAAGACC CATGGCCGTT ATCCGGAACA AGTTATTATA GGTTAAAACA GGTCGATACC
GACCAAACCT ATGCGTTTTC CCACGTAGTA ACCGTGCAAC GGCCCGGGTT TGCTGCGAGC
GTTTTTCCGA ATCCGGCAGA CCACATATTG TACTTGAAAA TACCCGTTCA GAAAGGCGGG
TCGAGCTACA CTGTTATGGA TGTTTCGGGG AACGTGCGGC TGCGCGGCTA TGTAATGACT
GGCCGGTCGT CGATTCCGAT CGGAAGCTTA TTACCGGGCT TTTATATCAT GAAAATCCTG
AATGATGACG GGACATCCGC TTTGTTGAAG TTTGTCAAAA AGTGA
 
Protein sequence
MASNSSSYLD ETGSDEDWIE LYNAGATPVD LSGYYLTDDA GELKKFQLPS SSGALTIQPG 
GFLILWASGL PSRGPKHLGF GLSGDGEQLL LVAPNETIID QLDFPKQRTD ISYGRKTNGS
SEIVYFSPSS PNAGNMAANS YTGFASPPVM SVESGFFQNS FTLTISTAVP GAEVYYTTDG
SQPDKNNITA PGKAYQFKNQ YPKNPGDGIG STFTNHFLTL KQNSPVNIPI TDKSGQPDVL
AAISATNDFI PTYNSVPVKP VYKGMVIRAK VYEAGKLPSE TESRTYLFTT DGQPKSQLAV
FSIKTDPDDM FDYEDGIGVA GKDFVDWRNA NPGAGSFGAP VGNYYRNTEI PSNVEVLING
SPVINQDLGL RIHGQGSRTS DKKSFRLYST GPNASQSDID YPLFPSLPFH TFRRLIMRNS
GNDYERTLMK DSYIHQIAKG LDIELQEYRP VTTYLNGEYW GIHDLRERQD EYYFASHYAL
EPENIEFFAD PEIENNSGHY ADLSNFIKTH NMADAGNYDY ALARMDIDNF IDYCILELYA
ANWDWPYGNV TYWRHKVPYS PAGGKGKDGR WRWALFDVDL SFEELDANQF PKALGAPDFL
LQYLLPNTTF RNKFINRYAD LINSHFQPQR LLDQINVCKN LIANEMPENI KRWNRPASMA
TWESNVNLMV NFATNRPNVA RGHIQGQFNL SAGTQQISVH VSNQDHGYVR VNTIDILPST
LGVSANPYPW NGIYFKNVNI SLTAIAKPGY KFLQWENLTT NAISHSATIG FAPSSSSNYR
AVFAVDVAPA QVPAPLDPSA CAYDFNAWLA TAAGNTFPDN MRFVYMENDD PDLNSPVVGF
TSGVYNLTSR TRINGLGDQG ISFINTGNAA GNPGYPGMKL GGAILALNTI GKTVASVKWT
GGTVTPNARP YAIRLQYRLS ETGPFTDVLN PNNQPVEYVR SATAGHEQVI DWVALPAEVL
NKPYVQLLWR YYCTDATLTG ARDELRLDDI MVQTCSDPLP VTLVSFNATT VEEKVLVTWA
TTEERDHDHF EVQRSHDARS WAALGRISGK GSVNSFNQYR FEDPWPLSGT SYYRLKQVDT
DQTYAFSHVV TVQRPGFAAS VFPNPADHIL YLKIPVQKGG SSYTVMDVSG NVRLRGYVMT
GRSSIPIGSL LPGFYIMKIL NDDGTSALLK FVKK