| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2637 |
|---|
| Symbol | |
|---|
| ID | 8226209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3257348 |
|---|
| End bp | 3258334 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644930468 |
|---|
| Product | fatty acid hydroxylase |
|---|
| Protein accession | YP_003087019 |
|---|
| Protein GI | 255036398 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.676355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGCA CATATGATTT TGAGGATCTC ATTCTAACAC TATCGACGCC GTTTTACATT
TGCCTGATCG GCCTTGAGAT CTTTTTAACA TACAAGACTT CCCATGAGGA ACTGGCCAAA
CGTCCGGCCT ATTCTCTGAA AGATACTTTG ACGAATGCCA CGCTTATGCT GCTCAACGGC
GGGATCGACC TGCTTTTCCG GGCTGCGTAT GTGGGCGTAC TCATCTGGTT TTATAATTTT
TCCTTTGTAG AACCAATCTC CAACCCCTAT TGGTACTGGC TGGCATTGTT CCTGGCCGAA
GACCTGGCAT TTTATACCCT GCATTACGTC GATCACCATT GCCGGTTATT CTGGGCGGTG
CATGTGACGC ACCATTCGTC GGAGCATTTC AATCTCACTA CGGGCTTCCG GTCGTCGGTA
TTCCAGCCGC TATACCGGTT CATTTACTTC ATTCCGCTGG CGTTGGTGGG TTTCAATCCG
GCTGATATCA TCGTCATGTA TTCCATCACG CAGATTTACG GCATCATCGT GCATACCGAG
TACGTGGGCA AACTGGGCTG GCTCGAATAC ATTTTCGTAA CGCCTTCGCA CCACCGCGTG
CACCATGCGA GCAATGTGCG GTACCTGGAT AAAAATATGG GCATGTGCCT GATCATCTGG
GACCGTATTT TCGGCACGTT TCAGGAAGAA CTACCCAGTG ACCCGCCGCG TTACGGCCTC
ACCAAGCAAA TGGAACAGCG GGGAATCAGG CAGACTATTT TTCACGAATG GCAGGCCATC
GGCGAAGATT TCATGCAGCC GGCCAGTTTT GCGACGAAGC TGAAATACCT CCTCAAAGCA
CCGGGCTGGT CGCCGGACGG CTCGCGTGAA ACCAGTAAGG ATTTGCAGCG AAAGCTGGCA
GATGTTACTT CGGCTATCGG CCGTCAGCCA TCAGACGATT TAAGCAATAA TTCTAAAAGC
CGGCAGGCAA TAGCCAACAG CCAATAG
|
|---|
| Protein sequence | MPGTYDFEDL ILTLSTPFYI CLIGLEIFLT YKTSHEELAK RPAYSLKDTL TNATLMLLNG
GIDLLFRAAY VGVLIWFYNF SFVEPISNPY WYWLALFLAE DLAFYTLHYV DHHCRLFWAV
HVTHHSSEHF NLTTGFRSSV FQPLYRFIYF IPLALVGFNP ADIIVMYSIT QIYGIIVHTE
YVGKLGWLEY IFVTPSHHRV HHASNVRYLD KNMGMCLIIW DRIFGTFQEE LPSDPPRYGL
TKQMEQRGIR QTIFHEWQAI GEDFMQPASF ATKLKYLLKA PGWSPDGSRE TSKDLQRKLA
DVTSAIGRQP SDDLSNNSKS RQAIANSQ
|
|---|
| |