| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2636 |
|---|
| Symbol | |
|---|
| ID | 8226208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3255668 |
|---|
| End bp | 3257158 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644930467 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003087018 |
|---|
| Protein GI | 255036397 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGATCA ATCAAGATAA TGTAAGACTG GTTTTCGGAC TCAAACTCAA ACAACTCCGG
CTCGACAAGG GAATGTCGCT CAGCGAACTT TCTCAGAAAT CGGGGTTGTC GATTTCGTAT
ATCAATGAAA TCGAGAAAGG AAAGAAATAC CCGAAATCCG ACAAGATCCT TGCATTGGCG
AGCGCCATTG AAGTCGATTA CGACACGCTG GTTTCATTAA AACTGAGCAA ACGGCTCGAA
CCGATTTCCG ATCTGCTCAG TTCGAATGTG CTAACGGAAT TACCGCTCGA ACTGTTCGGC
ATTGACCCGG CCAACCTGCT CGAAATCCTT TCCGACGCGC CCACCAAAAT CAGCGCATTT
GTAGGCACAC TCATCGAGAT CGCCCGGAAT TACAACATGT CGATCGAGAA GTTTTATTTC
TCGGCATTGC GGACTTATCA GGAAATGCAC GACAATTATT TTGAGGATAT CGAACTTGAA
GCGGAGCGAT TCCTGGAAGA GCACCATGTG GAAGCCAGCC GCCTTCTCGA CGAGCAGCAG
CTCGAAAGCA TTCTCAAAAC GCAATACCAT TACACGATCG AGCCGATCAA CGAGCGCACC
AACCCCGAAT TCGCGACGGT GCGGTCGCTC ACGATCACGA ACGCATCCGG CACCCGCCTT
TTGATCAACG CCCATTTATC CTCCGTACAA CGGGCATTTA TCTACGGGCG TGAGATAGGG
TATTTGTATC TTAATCTGAA AAACCGGCTG CATACGACAG CGCTCGTGGA AGCGGAGTCG
TTCGAGCAGT TGCTGAACAA TTTCAAGGCA TCCTATTTTG CCAGCGCGGT GATTATCAAG
CGGAGTTTGC TGGTGCCGGC CATTGCCAAC ATTTTTGCAC AAAAAACCTG GCAGCCGGAA
AGCCTCATTC AGCTCATTCA CGATTTCAAT ACAACGCCCG AGTCGTTTTG CTACCGGCTG
AGCAATGTGC TGCCCCGGTA TTTCGGCATT AATCAAATTT TCTTTGCGCG GTTCAACAAC
TTCGTCGGCC AGAATATCTT CCACATGACG AAGGAAATGC ATATTTCCAG AAAGCATTAC
CCGCACACGG TGCGCGACGA GCATTACTGC CGCCGCTGGG TTGCCCTTAC CGTCCTGAAC
GACCTGGGCG ACATGATTTT GGCCAAACAG CCGCCGCGCA TCCTCTGCAA AGCGCAGAAA
TCGACCTATA TCGACACCCA GGACCAGTAT CTGGTGGTGA GTTTTGCGCA ACCGATGTCG
CCTACGCCCA ACCTGAACGT GAGCGTGTCC ATGGGGATTT ATCTCGATGA GCAGACGCGT
GAAAAACTGG CATTTCTCGA TGATCCCGCC CTTAATTCCC GCGAGGTAAA CCAGACCTGC
GAACGCTGCT CGCTCTTCGA TTGCCGCGAG CGCATTGCAG CACCGGTGAT CCTCCAAAAA
CGGCATAAGA ACGAAGAGCT TCGGAAGGCA TTGAAAAAGA TGATTAATTA G
|
|---|
| Protein sequence | MAINQDNVRL VFGLKLKQLR LDKGMSLSEL SQKSGLSISY INEIEKGKKY PKSDKILALA
SAIEVDYDTL VSLKLSKRLE PISDLLSSNV LTELPLELFG IDPANLLEIL SDAPTKISAF
VGTLIEIARN YNMSIEKFYF SALRTYQEMH DNYFEDIELE AERFLEEHHV EASRLLDEQQ
LESILKTQYH YTIEPINERT NPEFATVRSL TITNASGTRL LINAHLSSVQ RAFIYGREIG
YLYLNLKNRL HTTALVEAES FEQLLNNFKA SYFASAVIIK RSLLVPAIAN IFAQKTWQPE
SLIQLIHDFN TTPESFCYRL SNVLPRYFGI NQIFFARFNN FVGQNIFHMT KEMHISRKHY
PHTVRDEHYC RRWVALTVLN DLGDMILAKQ PPRILCKAQK STYIDTQDQY LVVSFAQPMS
PTPNLNVSVS MGIYLDEQTR EKLAFLDDPA LNSREVNQTC ERCSLFDCRE RIAAPVILQK
RHKNEELRKA LKKMIN
|
|---|
| |