Gene Dfer_2634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2634 
SymbolleuS 
ID8226206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3251399 
End bp3254308 
Gene Length2910 bp 
Protein Length969 aa 
Translation table11 
GC content53% 
IMG OID644930465 
Productleucyl-tRNA synthetase 
Protein accessionYP_003087016 
Protein GI255036395 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0495] Leucyl-tRNA synthetase 
TIGRFAM ID[TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGT ACAGTCATCG CGAAATAGAA AAAAAATGGC AGGATTTCTG GCAGAAGAAC 
GGCACATTCA GCGTGTCCAA TGAGTCGGAG TTGCCGAAGT ATTATGTGTT GGATATGTTT
CCCTACCCTT CGGGCGCAGG GCTGCATGTG GGGCATCCGC TGGGGTATAT TGCCTCGGAT
ATCTATTCCC GTTACAAAAG GCTGAAAGGC TTCAACGTGC TGCATCCGAT GGGCTTCGAT
AGCTTCGGAT TGCCCGCCGA GCAATACGCC ATCCAAACCG GCCAGCACCC GGCCATTACC
ACCGAGCAGA ATATCAGCCG CTATATCGAG CAGCTGAAAA ACCTGGGACT CAGCTACGAC
TGGAACCGCG AAGTGCGGAC GTCCGACCCG GGCTACTATA AATGGACGCA ATGGATTTTC
TCGGAGCTGT TCAACAGCTG GTACAACAAC GATACCGACC AGGCGGAGCC GATTGAAACC
CTGACCGCGA AATTCGCGCA GGAAGGTAAT GCCAAAATCA ATGCACCTGC GGATGAAGAT
ACCCCCGCAT TCACTGCCGA AGAGTGGAAT GCATGGTCGG AAGAGGTACA ATATAAGATG
ACATTGAAAT ACCGCCTGAC CTACGTCGCC GACGCAACCG TAAACTGGTG CCCCGGCCTG
GGATCGGTAT TGTCGAACGA CGAGGTGAAA GACGGTGTTT CCGAACGCGG CGGCTTCCCC
GTGATCCAGA AACTGATGCG CCAATGGATG ATGCGCATCA CCGCATACGC ACAGCGATTG
ATCGACGGCC TGGACACGGT GGATTGGACG GAGTCATTGA AAGAGCAGCA GCGGAACTGG
ATCGGACGTT CGGTTGGAGC GTTGGTCAAA TTTCAGGTTT GGGAGGAAAG GGAAGATGGA
GGAAAGGGAG AAAGTGGTAT TGTAAATTCC CTTTCCTCCT TTCCTCCCTC TATCGAAGTG
TTCACAACAC GAGTAGACAC GATTTACGGC GTTACGTTTA TGGTAATCGC GCCGGAGCAT
GAGCTTGTGG ATGTGATCAC GACGCCGGAG CAGCGGGCGG AAATTGATGA CTACATTGCC
ATGACGCAGA AGAAATCGGA GCGCGACCGG ATGTCGGACG TGAAAACGGT TTCGGGTGCA
TTCACGGGTG CGTACGTGCT CAATCCGTTC AGCGGAGAAA AGGTGCCGGT TTACATTGCC
GACTACGTGC TGGCAGGCTA CGGAACCGGG GCGGTCATGG CCGTACCATC CGGCGACCAG
CGCGACTGGA ACTTCGCCAA GCATTTCAAC CTGCCCATTA TCCCGATCCT CGACGCGCAA
AAGGACATTG AAACACAAGC CGACGCGACG AAAGAAGGAA AATATATCAA TTCAGGCATT
ATCGACGGAT TGACCTACAA AGAGGCCACC GAAAAGCTGA TCAATGTACT GGAAGAAAAA
GGATTAGGTA AAGGAAAAAT CAACTACCGC CTGCGCGACG CGGTGTTCAG CCGCCAGCGT
TACTGGGGCG AGCCGGTGCC TGTTTATTAC AAAAATGACA GCGAAGGCCA GCCGGTACCA
TATCTGCTCG ACTTGAACGA GCTGCCGTTG AACCTGCCGG AAGTTGATAA ATACCTGCCG
ACTGAAAACG GAGAGCCGCC GCTGGGCCGC GCTGTTGGGT GGTCTTATGG CTCAGGTGTT
GGCTATAATT CGGGCTCTGG TCACGGTTAC GAAACCGGAG CAGGTTATAG CTACGAGCTC
AGCACCATGC CGGGCTGGGC GGGCAGCAGC TGGTACTGGT ACCGCTACAT GGACCCGAAA
AACGAGAACG AATTCGCATC GAAAGAGGCG ATCGGCTATT GGAAAGATGT GGATTTGTAC
ATCGGCGGCA CCGAGCACGC GACGGGGCAC TTACTGTACA GCCGTTTCTG GAACAAATTC
ATGAAAGACC GCGGATTTGT GCAGGAAGAG GAGCCGTTCA AAAAGCTCAT CAACCAGGGC
ATGATCCAGG GGCGCAGCAA CTTCGTGTAC CGCGTCAAAG GAGAGGATTA CAGCAAGCCT
GTGTTTGTAA GCGCCGGTTT GAAATCGCAA TATGAGGTTT CGGCATTGCA CGTGGATGTG
AATATTGTGG AAAACGACGT GCTGGATGTG GACAAGTTCA AAGCGACGCG GCCGGATATC
GCTGGCGAGC ATGCTGAGTT CATCCTCGAA GACGGCAAAT ACATTTGCGG TGTGGAAGTG
GAGAAAATGT CGAAATCGAA GTTTAACGTC GTGAACCCGG ACGATATCGT GGAGCGCTAC
GGGGCCGATA CCCTGCGGTT GTACGAAATG TTCCTCGGGC CGCTCGATCA GGCGAAACCC
TGGAATACCA ATGGAATCGA CGGAACGTAC CGCTTCATCC GTAAGCTGTG GCGCCTGTTT
TACACCGAAA CCGGCCAGTG GCAGGTGAAA GACGTTCCCG CGAAGCCCGA CGAATTGAAG
ACTTTGCACA AAACGATCAA AAAGATCGGT GAGGACATCG AAAACTTCTC GTTCAACACC
GCAGTGAGTG CGTTTATGGT GTGCGTGAAT GAGCTCGGCA GCCAGAAATG CCAGAGCAAA
GAAGTATTGC AGCAATTGGT AATCCTGCTT TCGCCCTACG CGCCGCATAT TTCGGAAGAA
TTGTGGACGG CATTGGGTAA TGAAGCAGGA GGTGTTTCCA AAGCCGAATT CCCGGTTTTT
GAAGCCAAAT ACGTGCAGGA TTCAGTATTC GAATATCCGG TGCAGATCAA TGGAAAAGTG
CGCGCGTCGT TGACATTCCC GCTGGACACG CCGGCGGCGG ACATCGAGAA GGAGGTATTG
GCCGACGTAA CCGTTCAGAA ATGGATGGAA GGCAAGCCTG CCAAAAAAGT GATCGTCGTT
CCAAAACGGA TTGTGAACGT GGTGATCTGA
 
Protein sequence
MSEYSHREIE KKWQDFWQKN GTFSVSNESE LPKYYVLDMF PYPSGAGLHV GHPLGYIASD 
IYSRYKRLKG FNVLHPMGFD SFGLPAEQYA IQTGQHPAIT TEQNISRYIE QLKNLGLSYD
WNREVRTSDP GYYKWTQWIF SELFNSWYNN DTDQAEPIET LTAKFAQEGN AKINAPADED
TPAFTAEEWN AWSEEVQYKM TLKYRLTYVA DATVNWCPGL GSVLSNDEVK DGVSERGGFP
VIQKLMRQWM MRITAYAQRL IDGLDTVDWT ESLKEQQRNW IGRSVGALVK FQVWEEREDG
GKGESGIVNS LSSFPPSIEV FTTRVDTIYG VTFMVIAPEH ELVDVITTPE QRAEIDDYIA
MTQKKSERDR MSDVKTVSGA FTGAYVLNPF SGEKVPVYIA DYVLAGYGTG AVMAVPSGDQ
RDWNFAKHFN LPIIPILDAQ KDIETQADAT KEGKYINSGI IDGLTYKEAT EKLINVLEEK
GLGKGKINYR LRDAVFSRQR YWGEPVPVYY KNDSEGQPVP YLLDLNELPL NLPEVDKYLP
TENGEPPLGR AVGWSYGSGV GYNSGSGHGY ETGAGYSYEL STMPGWAGSS WYWYRYMDPK
NENEFASKEA IGYWKDVDLY IGGTEHATGH LLYSRFWNKF MKDRGFVQEE EPFKKLINQG
MIQGRSNFVY RVKGEDYSKP VFVSAGLKSQ YEVSALHVDV NIVENDVLDV DKFKATRPDI
AGEHAEFILE DGKYICGVEV EKMSKSKFNV VNPDDIVERY GADTLRLYEM FLGPLDQAKP
WNTNGIDGTY RFIRKLWRLF YTETGQWQVK DVPAKPDELK TLHKTIKKIG EDIENFSFNT
AVSAFMVCVN ELGSQKCQSK EVLQQLVILL SPYAPHISEE LWTALGNEAG GVSKAEFPVF
EAKYVQDSVF EYPVQINGKV RASLTFPLDT PAADIEKEVL ADVTVQKWME GKPAKKVIVV
PKRIVNVVI