Gene Dfer_2632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2632 
Symbol 
ID8226204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3249976 
End bp3250782 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content54% 
IMG OID644930463 
Productglycoside hydrolase family 25 
Protein accessionYP_003087014 
Protein GI255036393 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA AGAAGACCCG CTCGTCAGTT AGTAATGTTA AATACCTGAA ACCGCTCCCT 
GCGAAGGGCT GGGCCATTAT CGCGGCCGTG GTAGTGATAA TCGGCGGACT GATCTGGTGG
AGCGATAAAA CAGACGAAAA TCAGTGGGAG TTTATCAGCA AGTTCGGTAT CAAGCTGCCG
CTGCGGTATG CCGTTCACGG GATCGACGTT TCGCACCACA ATGCGAAGAT CAATTGGGAT
AAACTCAAAA TGGCGCGCTC GGAAAATGTA AGTATTGATT TCGTGTATAT CAAAGCCACG
GAAGGCGCCA CGCACCTCGA CAGGCAGTTC AAACGCAACT GGGCGGAAGC CAGGCGGGTA
GGAATGAAGC GCGGTGCGTA CCATTTCTAT AATCCTAGGG TGATGTCCGA CCGCCAGGTT
GATAACTTCA TCGGCCAGGT AAGAATGGAA CCCGGGGACC TGCCGCCGGT GCTTGATCTG
GAAGTCAATG GCGGCAAGCC GGACGACATC ATTATCAAAG GTGTGCGCAA CTGGCTCACG
CTCATCGAGG CGCATTACGG CGTGAAGCCT ATCATTTACG TCAATGAGCA TTATTACAAA
AAATACATCG CCGGCAACTT CGACGATTAT CCGCTCTGGC TCGCGGGCTA CTCGCGCACG
CACCTGGACG ACCTCGCCTC CGACGCGCAC GTGCTGTTCT GGCAGCACAG CGAAAAGGGC
TGGGTGGACG GTATCCGGGG TTTTGTGGAT TACAATGTGT TCCTGCACGA GCGCACGGAG
TGGGACAATC TGGCCGACAG GGAGTAG
 
Protein sequence
MAKKKTRSSV SNVKYLKPLP AKGWAIIAAV VVIIGGLIWW SDKTDENQWE FISKFGIKLP 
LRYAVHGIDV SHHNAKINWD KLKMARSENV SIDFVYIKAT EGATHLDRQF KRNWAEARRV
GMKRGAYHFY NPRVMSDRQV DNFIGQVRME PGDLPPVLDL EVNGGKPDDI IIKGVRNWLT
LIEAHYGVKP IIYVNEHYYK KYIAGNFDDY PLWLAGYSRT HLDDLASDAH VLFWQHSEKG
WVDGIRGFVD YNVFLHERTE WDNLADRE