Gene Dfer_2630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2630 
Symbol 
ID8226202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3248044 
End bp3249102 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content54% 
IMG OID644930461 
ProductAgmatine deiminase 
Protein accessionYP_003087012 
Protein GI255036391 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2957] Peptidylarginine deiminase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCAA ATTCCGCTTC ATCGACGCCC CGCGAGCTGG GTTTTACATT TCCCGCCGAA 
TGGGCGCCGC ACCGCGCTAC CTGGCTTACT TTCCCGCACA ACGACGCCTC CTGGCAAGGC
GATAAGCTCG CCAAAATGCG TCCGCAATAC CTGGCGTTCA TCAAGGCCAT CAGCCAGGGC
GAAAAAGTGG GCGTTATCGC CAACGACGAA GCATTGAAGC AATTCATCAT CGGCGAGCTC
GACAAAACGG GTGTCGATTT GAATAAAATC GAGTTTATAG TAAAACCCAC CAACGACGCC
TGGTGCCGCG ACCATGGTCC TTCTTTTGTG GTAAATCCCA AAACCGGCGA AAAAATGATC
GTCGACTGGG GCCATAATGC CTGGGGAGGT AAATATCCGC CCTACGACGA CGATAACCGC
ACGCCGCGGG CCGTGGCCGA ATACCTGAAC CTGCCGGTTG TAAACCCGGG CATCATCATG
GAAGGCGGCT CGGTGGAATT CAATGGCGCG GGAACCATTC TCACCAGCGA ATCCTGCCTG
CTGAACCTGA ACCGCAACCC GCACCTGAAG CAAGCGCAGA TCGAGCAGCA TTTGTTTGAT
TATTATGGTG TAGAGCAAAT ACTGTGGGTA GAAGGCGGCA TAGAAGGCGA CGACACCGAC
GGCCATATTG ACGATACGAC GCGCTTTGTG AATGAAGATA CCGTCGTGGC TTGCGTAGAA
AGCAACCCGG CCGACGACAA CTACAAAATG CTGCAAACGA ATCTCGGCAT GCTGAAAAAC
ATGCGGCTGG TCAGCGGCAA GCAACTTAAT ATCATTGAAC TACCGATGCC GAAGGCGGTC
GTGATCGACG GTTTCCGCAC GCCAGGCTCG TATGCCAACT TTTTGATCTG CAATGCAGGC
GTGATCGTGC CGGTATTCAA CAATCCGCAC GACCAGGTCG CGATCGATAT TCTGGAAAAA
GCTTTTCCGG GCAGGAAAAT CATTCCGCTC CTGGCCACGG AAATTATCTG GGGACAAGGC
AGTTTCCATT GCCTGAGCCA GCAGGAGCCG CTGGTTTAA
 
Protein sequence
MTANSASSTP RELGFTFPAE WAPHRATWLT FPHNDASWQG DKLAKMRPQY LAFIKAISQG 
EKVGVIANDE ALKQFIIGEL DKTGVDLNKI EFIVKPTNDA WCRDHGPSFV VNPKTGEKMI
VDWGHNAWGG KYPPYDDDNR TPRAVAEYLN LPVVNPGIIM EGGSVEFNGA GTILTSESCL
LNLNRNPHLK QAQIEQHLFD YYGVEQILWV EGGIEGDDTD GHIDDTTRFV NEDTVVACVE
SNPADDNYKM LQTNLGMLKN MRLVSGKQLN IIELPMPKAV VIDGFRTPGS YANFLICNAG
VIVPVFNNPH DQVAIDILEK AFPGRKIIPL LATEIIWGQG SFHCLSQQEP LV