Gene Dfer_2628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2628 
Symbol 
ID8226200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3246189 
End bp3247289 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content47% 
IMG OID644930459 
Producthypothetical protein 
Protein accessionYP_003087010 
Protein GI255036389 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.804416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG CATTACAAAA AACCATCACG CTATTATTAT TAATTGCCCT GGGATTGTTG 
CTCAAAAGCA AGTTCAAGAA CAAGGACCAA ACCAACGGCA TCAAGGAGAT CATCCTCTCC
GTGGCGCTAC CCTCAACGAT ATTTATTTCA TTAATGAAGA TCGACATCGA TTCGTCGATG
TTTATCATTC CGCTCGTTAC GCTCGTTTTC AACTTCCTGA TGTTCTTTTC CGCGCCGCTG
GCATTCGCAT TGTTCGGCAT TGAAAAAAAC AGCCCTACCG GTCGCACATT GATGATGCTC
ATTCCTTCAT TGGCGCCGGG GTTATCGTGT TTTCCGTTCA TCGCGGAGTT TTTGGGTGAA
AAAAGCCTGG CTATTGCGGC GCTGGCGGAT GTGGGCAACA AGTTTTTTGT ACTCATTTCG
CTCTACATTC TCGCGATGAA TATGTTTTTG AAAAACAGCG ATGACAAGGA AACCAAAATG
ACCGGAAAGC TGAAAAGCCT CTTCGCGAGT ATGTTTCAGG AGCCCATTAA CCTGCTCATT
TTCATCGCAA TCATATTGCT TAGCCTGGGT ATCAATTACA GCACATTACC GCCATTGGTA
GTGGATATTT TTGATAAAAC CAGCGCGATG ATGACGCCGC TCGTGCTGCT CTTTATCGGC
CTGGCCGTGC AACTGAAAGA AGGTAAGAAG CGTATTGTTG CCAGTATCCT GTTCTTCCGC
GCGGGCATTA CGATGCTTAT CAGCGCGGGA ATGATTTACG TGCTCAACAT TACCGACCAG
AACATGGTGC TGCTTTCGAT CGTGATCCCG CTCAGTGCCG CCAGTTTCTG GCCGCTCGCG
CACATTTCGG CATTCAACCT GCGGGAGGAT GCCAAGGCGA TGCCTAAGGA AAAAAGAACA
TTTGACCTGG AACTCGCTGT GTTGTTACTT GCATTCTCAT TACCATTCTC AACGATATTA
ATTTTGGCAA TCCTGTCTTC CGGTTCATTC TTCGCACATA CTTCCACGCT CATCACCGCC
GGGCTCGTAT TGATCTGCCT CGGTGCGGTG CCTAATGTGC TCGGGAAAGT ATTTGTGAAA
ATGTCGAAGG CATCGTCGTA A
 
Protein sequence
MSDALQKTIT LLLLIALGLL LKSKFKNKDQ TNGIKEIILS VALPSTIFIS LMKIDIDSSM 
FIIPLVTLVF NFLMFFSAPL AFALFGIEKN SPTGRTLMML IPSLAPGLSC FPFIAEFLGE
KSLAIAALAD VGNKFFVLIS LYILAMNMFL KNSDDKETKM TGKLKSLFAS MFQEPINLLI
FIAIILLSLG INYSTLPPLV VDIFDKTSAM MTPLVLLFIG LAVQLKEGKK RIVASILFFR
AGITMLISAG MIYVLNITDQ NMVLLSIVIP LSAASFWPLA HISAFNLRED AKAMPKEKRT
FDLELAVLLL AFSLPFSTIL ILAILSSGSF FAHTSTLITA GLVLICLGAV PNVLGKVFVK
MSKASS