Gene Dfer_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2618 
Symbol 
ID8226190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3232250 
End bp3234478 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content51% 
IMG OID644930449 
ProductSulfite reductase (ferredoxin) 
Protein accessionYP_003087000 
Protein GI255036379 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT TAATCATTTC TGACAAAGTA TCCGCCGTTG CGAAGCGCGA TATCATTGAC 
CTGCAACAAA AAATCGGTGG ATTCTACTCC GGTGAAACCC CGGAAGAGGC ATTCCGTAAA
TTCCGCCTTA CCCGCGGGGT GTATGGTCAG CGTCAGCCCG GCGTGCAGAT GATTCGTATC
AAATTGCCAT ACGGACGCAT CACAGCCGAT CAGCTGGTCC GCATTGCAGA TACTTCCGAC
AAATTTGCAA CCGGTAACCT GCACGCCACC ACGCGCCAGG ATATCCAGCT GCACTTTGTA
AAACTTTCGG ATTCGCCGCA ATTGTGGGCC GATCTGGAAG ATGCGGGCAT CACGCTGAAA
GAAGCTTGTG GTAACACGAT TCGCAACGTA ACGGCGTCGT CTATCGCGGG TATCGATCCC
GATGAGCCGT TTGACGTGAC GCCGATCACC CATTCGATCT TCTCCTACTT CCTCCGCAAC
CCGATCAACC AGGATATGGG CCGGAAGTTC AAAATTGCGG TTTCATCCTC TGAAAAGGAC
ACCGCGCTGG CCTTCATCCA CGACGTGGGT CTGATCGCTA AAATGGGTCA GAATGAAGCG
GGTGAAACCG TTCGCGGTTT CAAAGTGCTT ATCGGCGGCG GCCTTGGCGC GCAGCCTTTC
TCGGCACAAA CTGCATTCGA ATTCCTCGAA GAAGAAAAGG TGATCCCATT CATCGAAGCC
ATGCTTCGCG TGTTCGATCG CTACGGCGAG CGCGTACGTC GCCATAAGGC GCGTATGAAG
TTCCTTTTGA ACGACCTCGG CCTCGAAGGC ATGATGGAGA AAGTGGAGGA AGAACGCAAA
GCGGTTAGAA ACAAGATATT CCAGATTCCG GAAGACCTTT TCGGCACCAA TGAATACGAG
GCCATTAACC ACGCGCCGCG TCCGTCATTG TCCGAAGCGG AAATCCTGAA AATCGCTGCT
GAAAGCATCG AAGCCGACAA GCTCGATATT TTCACCAAAT GGCTGCGTAC CAATACATTT
GAACAAAAAC AAAAAGGCTG GTATGCCGTG CAGCTGCGCG TATTGCTGGG TGATATGAAT
TCCGACACCG CACGCAGTCT CGCCGATGTG GTTCGTCAAT ATGCGGCCGA CGACATTCGT
GTAACCGTGA ACCAGGGCTA CATTCTCCGT TTTGTGAAAG GCGAAGACCT CGTAGCATTG
TACCACGAAC TCGCGAAACT GGGCCTCGCA GCTCCCGGCT TCGACAGCAC GATGGACATT
ACAACCTGCC CCGGAACCGA TACTTGTAAC CTTGCCATTT CGAGCAGCTA CGGTATCACC
CGCGTGCTCG AAGACGTAAT GCGCGATGAG TTTCCGGAAA TGATTTATAA TCAGGACATT
AAAATCAAAA TCAGCGGCTG TATGAACGGT TGCGGCCAGC ACAATGCGGC CAATATCGGT
TTCCACGGCA GCTCGATCAA GAACGGCAAG CTGGTATTGC CTGCATTGCA GGTTTTGCTA
GGCGGCGGTT TCTCCGGCGA TGGCATCGGG CTGATCGGCG ATAAGGTGAT CAAAGTTCCA
ACCAAACGCG GACCGGAAGT TTTGCGCCTG ATTTTCAACG ATTACGAAGC CAATGCACTG
GACGGCGAGT ATTTCAACCA ATATTACCTC CGCCAGACTA AAAATTACTT CTTCCAGCTC
CTGAAACCAC TCGCAGACCT GACGACCGTA CAAGACGACG ACTACCGCGA CTGGGACCAC
GATGAGTTGT TCAAAACGGA AATCGGGGTT GGAGAATGTG CTTCGGTGCT CGTTGACCTC
GTGGCGACGA CCATTATCGA AGGTCAGGAA AAACTGAACC TGGCGAAAGA ATCTTTCCAG
TCGGACGTTT GGGCGGATGC CATTTACCAC GCTTACAACG TGTTCATCAC CGGTGCGAAA
GGCTTGCTGA TGTCGAAAGA CGTGACTACC AACACGCAAT ATGGCATTAT CAACGATTTC
GAAACGCATT TCGGCGCGGA TTTCAAGTAC AATGTCCCTG CTGAATTTGC AGTAGAAAAT
CAAGCCGAAA CGCCGTTTAA AGCATTGGTA TTCAGCATTA ATAAATTCGA ACCAAGCGAA
GCATTTGCCA GCTATTTCAT CAATACTGCC GAAAGCTTCC TGAATTTCGT CCGCGAAACC
CGCGAGGCGC AATTGATCGA AACCGGAGAG CCTGCATTGC AAGAGCTTTC ATTCGGAAAA
GATAGCTAA
 
Protein sequence
MSDLIISDKV SAVAKRDIID LQQKIGGFYS GETPEEAFRK FRLTRGVYGQ RQPGVQMIRI 
KLPYGRITAD QLVRIADTSD KFATGNLHAT TRQDIQLHFV KLSDSPQLWA DLEDAGITLK
EACGNTIRNV TASSIAGIDP DEPFDVTPIT HSIFSYFLRN PINQDMGRKF KIAVSSSEKD
TALAFIHDVG LIAKMGQNEA GETVRGFKVL IGGGLGAQPF SAQTAFEFLE EEKVIPFIEA
MLRVFDRYGE RVRRHKARMK FLLNDLGLEG MMEKVEEERK AVRNKIFQIP EDLFGTNEYE
AINHAPRPSL SEAEILKIAA ESIEADKLDI FTKWLRTNTF EQKQKGWYAV QLRVLLGDMN
SDTARSLADV VRQYAADDIR VTVNQGYILR FVKGEDLVAL YHELAKLGLA APGFDSTMDI
TTCPGTDTCN LAISSSYGIT RVLEDVMRDE FPEMIYNQDI KIKISGCMNG CGQHNAANIG
FHGSSIKNGK LVLPALQVLL GGGFSGDGIG LIGDKVIKVP TKRGPEVLRL IFNDYEANAL
DGEYFNQYYL RQTKNYFFQL LKPLADLTTV QDDDYRDWDH DELFKTEIGV GECASVLVDL
VATTIIEGQE KLNLAKESFQ SDVWADAIYH AYNVFITGAK GLLMSKDVTT NTQYGIINDF
ETHFGADFKY NVPAEFAVEN QAETPFKALV FSINKFEPSE AFASYFINTA ESFLNFVRET
REAQLIETGE PALQELSFGK DS