| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2601 |
|---|
| Symbol | |
|---|
| ID | 8226173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 3206557 |
|---|
| End bp | 3207723 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644930432 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003086983 |
|---|
| Protein GI | 255036362 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGT GCGTGAAGTG TGCGCAGGTG GACGGCATTA TGAAAGCGGG TTATGTGAGA
GGCAAGCAGC GCTACCTGTG CAAATGGTGT AACTATTATT TCACCCATGC CGAAAAGGAC
GACTCCATTG AATCGCTCGT GAAGCGGAAG CGGCATCAGA CGACCATTAT CGATATTGCG
AAGTCGCTGG GCGTATCCAA CTCGACCGTT TCGCGGGCAT TGCACGGCCA TGCGGACATC
AGTCCCGAAA CCCGCCAGGC GGTGCTCGAT AAAGCCGCTC AGCTGGATTA CCAGCCTAAC
CAGCTCGCTT ACAGCCTGGT TAAGAGCAAG ACCAACACTA TTGGAATGAT CGTTCCGGAA
TTCCAGAACC AGTTCTTTCC CAATGTGATC ATCGGAGCGC ACGAGGTGCT GACGGAGGCC
GGGTATAACC TCACGATCAT GCAGAGTAAT GAGTCATACC AGGTCGAGAT ATCGAACACA
AAGGCCATGC TCGCCAACCG CATCGACGGC CTGCTGATTT CGCTTACACA GGAAACCAAC
AACTTCGACC ACCTGAGCGT GTTCGCCAAG CGCGGCATTC CACTGATCCA GTTCAACCGT
GTATGCGATC AGATCGACGT GCCGAAAGTG GTCGTGAATG ATTTCGAAGC GTCGTTCCGG
GCGGTAGAAC ACCTCATTCT GAATGGCTAC GAACGCATTG CGCATTTGGG CGGTCCGCTC
ACTTTACAGG TAAGTCAGGA GCGCCTCCGC GGATACCGTG CGGCGATGGA GAAATACGGC
AAGCCGATCG ACGATCACAT GATCATCCAG GGCATGCTCA CGCAGCAGAA AGCGCGCATT
TACGGCCAAT ACCTCCTCGA CCTTGCCAAC CGCCCCGACG CGATCTTTGC CGTAAACGAC
TCGTCGGCCA TCGAAATCAT GCTTATGGCC CGGGAAAAGG GTATATCCAT TCCCGACGAA
CTCGGGGTGG TCGGTTTCAG CGACAATGCA GAATCGGCGT ACATCGGCCC GGGCCTCACC
ACCGTTCGCC AGCCAACCAT GCAAATCGGC CGCACCACCG CCGAATGGAT CTTGCAGCTC
GTCGATGCCG AAGAGGCGAT CGTGAACGAA AAGCGGGTTC TGAGTACAGA GCTGGTCGTA
CGCGGGTCGT CGCAGCGGTG CAGGTAA
|
|---|
| Protein sequence | MIECVKCAQV DGIMKAGYVR GKQRYLCKWC NYYFTHAEKD DSIESLVKRK RHQTTIIDIA
KSLGVSNSTV SRALHGHADI SPETRQAVLD KAAQLDYQPN QLAYSLVKSK TNTIGMIVPE
FQNQFFPNVI IGAHEVLTEA GYNLTIMQSN ESYQVEISNT KAMLANRIDG LLISLTQETN
NFDHLSVFAK RGIPLIQFNR VCDQIDVPKV VVNDFEASFR AVEHLILNGY ERIAHLGGPL
TLQVSQERLR GYRAAMEKYG KPIDDHMIIQ GMLTQQKARI YGQYLLDLAN RPDAIFAVND
SSAIEIMLMA REKGISIPDE LGVVGFSDNA ESAYIGPGLT TVRQPTMQIG RTTAEWILQL
VDAEEAIVNE KRVLSTELVV RGSSQRCR
|
|---|
| |