Gene Dfer_2594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2594 
Symbol 
ID8226166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3199609 
End bp3200637 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content58% 
IMG OID644930425 
ProductN(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 
Protein accessionYP_003086976 
Protein GI255036355 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1446] Asparaginase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA ATCGTCGCTC CTTTCTCCGC TTGTCGGCCA TCGCTTTGCC GTTCACGCGC 
GTGAACCAGT TATTTGCCAA AGCACCTGTG GCCAGCGGCC CGGTGGTGAT CTCCACCTGG
GACAGCGGAC AAATTTCAAA TGCGGCGGCC TGGCCCGTGC TGGAAAAAGG AGGCCGCGCC
CTCGACGCCG TGGAGCAGGC GGCCATCGCG ATCGAAAACG ATATCAACTG CTGCGTAGGC
CTCGGCGGTA ACCCCGACCG CGACGGCCAC GTGACGCTCG ACGCCTGCAT CATGGACGAA
AAGTCGAACT GCGGCGCGGT AGCATTCCTC GAAAGGATCA AACACCCGGT GTCCGTAGCG
CGCAAGCTGA TGGAAACCAC GCCCCACGTG TTCCTAGTAG GCGCTGGCGC GCAGCAATTT
GCATTGGCAA ACGGTTTCAA GCTGGAATCG GGTAAACTTT CGCCCGATGC GGATAAAGAG
TATAAAAAAT GGCTAAAAAA GGCTGAATAC AAGCCTGTTA TCAATATCGA ACACCGGCAG
TCGAAAGGCC ACGGACCATT TGCACCAGCC CGCCTGGACG ACGGCTCGTT CAACCACGAC
ACCATGGGCA CACTCGCGCT GGACGCGAAG GGCGACCTCT CGGGCATGTG TACCACAAGC
GGAATGGGCT TTAAAATGCG CGGCCGCGTA GGCGACTCCC CGATCATCGG AGCAGGCTTG
TTCGTCGATA ATGAAGTGGG CGCCGCTACC TCGTCCGGCC AGGGCGAAGA AGTGATCCGC
GTTGCGGGGA CGCACTTGGT GGTCGAATTC ATGCGCAATG GCTCCTCACC GGAAGAAGCC
TGTAAAAAAG CGGTCGAAAG GATCGTAAAC CGCGACCCTG CGCGCGCCAA AACGTTCCAG
GTAGGCTTCC TGGCAATCAA TAAGCAGGGT GAAGTAGGTG CTTACTCGGT GCAGCCGGGA
TTTGCCTACA CCATCACCAC CGGCGACGGA AAAGGCAAAG TGGTGGCCTC GAAAAGTCAT
TTCGCGTAA
 
Protein sequence
MNTNRRSFLR LSAIALPFTR VNQLFAKAPV ASGPVVISTW DSGQISNAAA WPVLEKGGRA 
LDAVEQAAIA IENDINCCVG LGGNPDRDGH VTLDACIMDE KSNCGAVAFL ERIKHPVSVA
RKLMETTPHV FLVGAGAQQF ALANGFKLES GKLSPDADKE YKKWLKKAEY KPVINIEHRQ
SKGHGPFAPA RLDDGSFNHD TMGTLALDAK GDLSGMCTTS GMGFKMRGRV GDSPIIGAGL
FVDNEVGAAT SSGQGEEVIR VAGTHLVVEF MRNGSSPEEA CKKAVERIVN RDPARAKTFQ
VGFLAINKQG EVGAYSVQPG FAYTITTGDG KGKVVASKSH FA