Gene Dfer_2590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2590 
Symbol 
ID8226162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3195939 
End bp3196649 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content55% 
IMG OID644930421 
Productshort chain dehydrogenase 
Protein accessionYP_003086972 
Protein GI255036351 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA CAATCAAAAC AGCCCTGATC ACAGGAGGCT CCAAAGGCAT AGGTTACGGC 
ATCGCCGAAG TGTTGATCCG CGACGGTATC CGCGTAGCGA TCACCAGCCG CTCGAAAGCG
AATGCAGAAG AAGCGGCCAA GGCCCTGAAC AAAATCCGCG ACGGCTACGC GCTGGGCATC
GAGTCGGACG TGCGCGACCT TTCTTCGCAG GAAAATGCGG TGCAAACCGT GCTATCGCAA
TGGGGACGCC TCGATTACTT CATCGCCAAC GCAGGCGTGG GCCATTTCGC CCCCATCCAG
GAACTAAGCG CCGAGCATTG GCAGGAAACG ATCGACATTA ACCTGACCGG CGTTTTTTAC
AGTGCAAAAG CATCCTTGCC GGCATTAACC GAGTCGAAAG GCTATTTTAT CAACATCGCG
AGCCTGGCCG GTACCAACTT CTTTGCGAAC GGAACTGCCT ATAATGCCAG CAAATTCGGC
CTAGTAGGCT TCTCGCAGGC GATGATGCTC GACGTGCGCA ATGCGGGCAT AAAAGTAACG
ACTATCATGC CGGGCTCCGT GGCAACGGAG TTCAACAACC ACCAGCCATC GGACAAAGAC
GCCTGGAAAA TTCAGCCGGA AGACATCGGA CAAATCGTAT CAGACCTGAT CAAAATGCCG
GCACGGACGC TGCCTAGCAA AATTGAGGTC CGCCCGACAA CACCGAAATA A
 
Protein sequence
MAETIKTALI TGGSKGIGYG IAEVLIRDGI RVAITSRSKA NAEEAAKALN KIRDGYALGI 
ESDVRDLSSQ ENAVQTVLSQ WGRLDYFIAN AGVGHFAPIQ ELSAEHWQET IDINLTGVFY
SAKASLPALT ESKGYFINIA SLAGTNFFAN GTAYNASKFG LVGFSQAMML DVRNAGIKVT
TIMPGSVATE FNNHQPSDKD AWKIQPEDIG QIVSDLIKMP ARTLPSKIEV RPTTPK