| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2581 |
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| Symbol | |
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| ID | 8226153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3185527 |
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| End bp | 3186087 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644930412 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_003086963 |
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| Protein GI | 255036342 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00383976 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAGG ATAACTGTTA TTTATTGGGC TATATCGTGC GGACCCACGG GACTGCCGGC
AATGTGGTGA TTTATCTGGA TGTGGATTAT CCGGAAGATT ACGGAGACCT GGAAACGGTT
TACGTCGAGA TTAAAGGCGA ACTGGTCCCT TACTTTGTGG ATGAGATCAA TTTGCAGAAG
CAAAGCAATG CGATCGTCAC TTTTGAGGAT ATCGACACCA TTGAAAAGGC GCAAAAGCTG
GTAGGAAGCT CACTTTACAT GCCGCTGGAA GACTTGGCCG AGCTGGGCGA AGACGAATTC
TACTATCACG AAATCAAAGG TTTTAAAGTA GTAGATCAAA CGAAAGGCGA TCTCGGCATC
GTTCGGGAAG TCTATTCGCT GAATGGCCAG GACCTGATCG CGATGGACTT CCAGGGCTCG
GAAGTGCTGA TCCCTACTGC AAATGACATT GTGATCAAAG CGGATAAGGA TGCCAAATCG
CTGCTTGTAA ACCTGCCGGA AGGTCTCCTG GAAGTGTATC TCGATAACTC ATCTGATAGC
ATTCCCGATG ATGCGGATTG A
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| Protein sequence | MTQDNCYLLG YIVRTHGTAG NVVIYLDVDY PEDYGDLETV YVEIKGELVP YFVDEINLQK
QSNAIVTFED IDTIEKAQKL VGSSLYMPLE DLAELGEDEF YYHEIKGFKV VDQTKGDLGI
VREVYSLNGQ DLIAMDFQGS EVLIPTANDI VIKADKDAKS LLVNLPEGLL EVYLDNSSDS
IPDDAD
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