Gene Dfer_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2580 
Symbol 
ID8226152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3184863 
End bp3185537 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content55% 
IMG OID644930411 
ProducttRNA (guanine-N1)-methyltransferase 
Protein accessionYP_003086962 
Protein GI255036341 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0336] tRNA-(guanine-N1)-methyltransferase 
TIGRFAM ID[TIGR00088] tRNA (guanine-N1)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0435516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTG ATATATTGAG CTGCGTACCG AGCTTGCTCG ACAGCTTTTT TGCGCATTCT 
ATCCTGAAAA GGGCACAGCA GGCGAATCAT GTGGAAGTCG TTATCCACGA CATCCGCGAT
TATTCCACCA ACAAGCACCG CACGATCGAC GACTATGCAT TCGGCGGCGG TGCGGGCATG
GTGTTGCAAA TCGAGCCGAT CGCGCGCTGC ATCCGTGCAT TGCAGGCGGA GCGTACGTAC
GACGAGATCA TTTACCTCAC ACCGGACGGC GAGCAAATGC AGCAGCGCAT GGTGAACCAG
CTTTCGCTGA AAGGCAACCT GATGATGCTC TGCGGGCATT ACAAGGGCGT CGACCAGCGC
GTGCGCGATC TGTTTGTAAC AAAGGAAATC AGCATTGGAG ACTACGTGCT TTCAGGAGGC
GAACTGGCTG CCGCGGTGCT GGCCGACTCC ATTATCCGAC TCATTCCGGG GGTGCTGAAT
GACGAAACTT CCGCATTGAC GGACTCATTC CAGGATAACC TCCTGGCTCC GCCTGTATAT
TCCCGCCCGG CTGATTTCGA AGGCCATAAA GTGCCCGAAA TACTGATGTC GGGGCATGAA
GCGAAGATCG AGGAGTGGCG TTATGAGCAA TCGCTCAAAA GAACGAAAGA GAGAAGGCCG
GACCTGTTGC AATAG
 
Protein sequence
MRIDILSCVP SLLDSFFAHS ILKRAQQANH VEVVIHDIRD YSTNKHRTID DYAFGGGAGM 
VLQIEPIARC IRALQAERTY DEIIYLTPDG EQMQQRMVNQ LSLKGNLMML CGHYKGVDQR
VRDLFVTKEI SIGDYVLSGG ELAAAVLADS IIRLIPGVLN DETSALTDSF QDNLLAPPVY
SRPADFEGHK VPEILMSGHE AKIEEWRYEQ SLKRTKERRP DLLQ