| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2560 |
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| Symbol | |
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| ID | 8226132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3162682 |
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| End bp | 3163998 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644930392 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003086943 |
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| Protein GI | 255036322 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACC TGTTCCATGT CACAGGAATG CTATGCCTGA TGCTTTTTCA ACGAACGGAA
GCGCAGGAAT ACGACCTGAA CCAACTGCTC GACCTGGCTA TGAAAAACGA CTTTACCGTG
CAAACGGCGC AGTTGGATGA AGCAAAGGTG AATGCGCAGA TCAGCGAGGT GAAAGCGGGC
ATGCTGCCTA CGCTCAATGT GTCGGGGGAT TACAAGCGAT ACTTCAAAAT CCCGGGCCAG
GTGGTGCCGG CGAGTGCGTT CGGCGGGCCC GAGGGACAGT TTACCACGCT TGCATTCGGG
TTGCCGTATA ACCTGTCGAC CACGGCGCAA GTGACTCAGG CTCTGTATAA TCCATCCCTT
AAATACGCAT TGAAAGCCGC CAGTCTAAAC CGCGAACTGA CCTCGCTCAG CACCACGAAA
ACGAAGGAAG ATGTGGCTTA TAACGTAACC GACGCCTATT ATAGCCTCGT GACCGTGTCG
CAGCAAATGG CGTTTCTGGA CAGCAACCTC ATTTCCCTCG ATCGATTGTA TAAAGTGTCG
GACCTCCTAT ATCAGAACAA GTTAGGCCAG CGCGTGGATG TGGACAGGAT TTTGATCAAC
AAAACAAGCA CGCAAACGCA GCAGGCAACG CTTCGGGACA ATTACAACCA GCTTGTTAAC
CTTTTGAAAT ACTACGCAGG CATTCCTCAA AACGATTCTT TGCGTATAAT GATAAGCGTT
CGTGATGTGG CGTTGCCGAC CTATGCCGAT TGGGACAAAA CCAGACGCAC TGACGTGGCA
TTGCTGCAAA AGCAAAAAGA CCTTAACGAA TTGCAGGACA AGAATATACG CTCTGGCCTG
ATCCCGACCG TAAATGCCTA CGGCGTGGCA AACATGGCCT TCTACGCACA AGGCGGCGAG
AACTCAACCT TCCAGGATGT ACCGGGCTAC TGGGCCGGTT TGCAGCTCAA CTGGAATGTG
TTCGATGGCC TGGCCCGAAG GGCGAAACGC AGCCAGAATA TGATCGACAA GCAGAAGCTC
GACGTGCAGC TCCGGCAGGT TAGCGAGGTC ATTCAAATGG AAGAAAACAA TGCACGCAAC
AAGTTCGGCG TGGAGCAAAA GAACATCAAT GCCAAAAAAG ACCAGGTAGC GCTTGCCGAA
AAAGTGTACA AGCAAATCCA GCTGCAATTC AAGGAAGGAA CGGTGTCGCT CACGGACGTG
ATCCAGGCCG AAAACAGCCT CCTCGACGCG CAAAACAACT ACCTGACATC ACTCGTACAA
CTCCTGAAAG CCGAGCTCGA ATGGAAAAAA GCCACCGGGC AACTCGTTCA GAAATAA
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| Protein sequence | MKHLFHVTGM LCLMLFQRTE AQEYDLNQLL DLAMKNDFTV QTAQLDEAKV NAQISEVKAG
MLPTLNVSGD YKRYFKIPGQ VVPASAFGGP EGQFTTLAFG LPYNLSTTAQ VTQALYNPSL
KYALKAASLN RELTSLSTTK TKEDVAYNVT DAYYSLVTVS QQMAFLDSNL ISLDRLYKVS
DLLYQNKLGQ RVDVDRILIN KTSTQTQQAT LRDNYNQLVN LLKYYAGIPQ NDSLRIMISV
RDVALPTYAD WDKTRRTDVA LLQKQKDLNE LQDKNIRSGL IPTVNAYGVA NMAFYAQGGE
NSTFQDVPGY WAGLQLNWNV FDGLARRAKR SQNMIDKQKL DVQLRQVSEV IQMEENNARN
KFGVEQKNIN AKKDQVALAE KVYKQIQLQF KEGTVSLTDV IQAENSLLDA QNNYLTSLVQ
LLKAELEWKK ATGQLVQK
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