Gene Dfer_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2557 
Symbol 
ID8226129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3156573 
End bp3157784 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content54% 
IMG OID644930389 
ProductGlycine C-acetyltransferase 
Protein accessionYP_003086940 
Protein GI255036319 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.470257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAAA TCTTAAATAA TCGCATCGCC GAATTCAAAG ACCCGGCGAT CGCAAGAGCA 
AAAGGTGTAT ATCCTTTTTT CAGACCGATC GAGTCCGGAC AGGACACAGA GGTTATCATC
AACGGGAAGC CGGTCCTCAT GTTCGGATCC AATTCCTACC TGGGACTCAC TTCCCATCCC
TACATCATCG AAGCGTCGCA AAAAGCCGCG CAGAAATACG GAACAGGTTG CGCGGGCTCG
CGCTTCCTCA ACGGAACCCT CGATATCCAC GAGGAGCTGG AACGCCGCCT CGCCAAATAC
ACTGGCAAAG AAGGAGCAGT GCTGTTCAGC ACCGGTTATC AGGCCAACCT GGGTGCATTA
TCCTGCCTCA CAGGCCGTAA CGACTACCTC ATCCTCGACG AAAGCGACCA TGCTTCCATT
ATCGACGGAA GCCGCCTGTC GTTCTCGAAA GTGATCAAAT ACAAGCACAA CGACATGGAC
GACCTGCGCA AAAAGCTGGC GCTCCTGCCC GAGGAAGCTG TGAAACTGAT CGCGACCGAC
GGTATTTTCA GTATGGAAGG GGACATCGTC AAACTCCCTG AACTGAATGC GATCGCACAG
GAATACGATG CAACAGTGCT CGTGGACGAC GCACACAGCC TGGGTGTAAT CGGTGAAAAG
GGCGCGGGAA CTGCTTCTTA TTTTGGATTA ACCGAAACAA CGGACCTCAT TATGGGAACA
TTCAGCAAGT CGCTGGCTTC GCTGGGAGGT TTCATTGCCG GTGACGCCGC CACTATCGAC
TACCTGAAAC ACCGCGCGCG CTCGCTCATG TTCAGCGCGA GCATGACGCC CGCGTCCGTG
GGAAGCACAT TGGCCGCTTT GGATATTATC GAGACGGAAC CGCACCACAT GGAACGCCTT
TGGGCCAATA CCAGATACGC CAAAGAGTTG CTGCTCGTGA ATGGTTTCGA CCTGGGCGCA
ACCGAAAGCC CGATCCTGCC GCTGTACATC CGCGACAACG AGAAGACTTT CATCATGACA
CGCAGATTGC AGGACGAGGG GGTTTTCGTG AACCCGGTGG TTTCGCCAGG GGTACGCCCG
GAACAGTCGC TGATCCGTTT CTCGCTCATG GCTACGCATA CATTCAGCCA GATTGAGGAG
GCAGTGGATA AAATGTCCCG CATTTACCGT GAGGTTTGTC CCGACGCTAT TATCGAAAGA
CAAAGACTAT GA
 
Protein sequence
MGKILNNRIA EFKDPAIARA KGVYPFFRPI ESGQDTEVII NGKPVLMFGS NSYLGLTSHP 
YIIEASQKAA QKYGTGCAGS RFLNGTLDIH EELERRLAKY TGKEGAVLFS TGYQANLGAL
SCLTGRNDYL ILDESDHASI IDGSRLSFSK VIKYKHNDMD DLRKKLALLP EEAVKLIATD
GIFSMEGDIV KLPELNAIAQ EYDATVLVDD AHSLGVIGEK GAGTASYFGL TETTDLIMGT
FSKSLASLGG FIAGDAATID YLKHRARSLM FSASMTPASV GSTLAALDII ETEPHHMERL
WANTRYAKEL LLVNGFDLGA TESPILPLYI RDNEKTFIMT RRLQDEGVFV NPVVSPGVRP
EQSLIRFSLM ATHTFSQIEE AVDKMSRIYR EVCPDAIIER QRL