Gene Dfer_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2548 
Symbol 
ID8226120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3146265 
End bp3147185 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content52% 
IMG OID644930380 
ProductPfkB domain protein 
Protein accessionYP_003086931 
Protein GI255036310 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTA CCATGTACGA CATTTGTACC ATCGGGCATA TCACTTTGGA TAAAGTGGTT 
ACTGCCCAGT CTGTCAAGTA TATGCCCGGG GGCACTTCGT TCTATTTCTC GAAGGCGCTC
CGGCAGTTCG ACGTCCGCTA TATGCTCGTA ACGGCATTGG CCGAAAAGGA AGCCCATGTT
GTGGCCGGCC TGCGGGAGGA GAACATCGAA GTTTTTTCCC AGAACAGTCC TTACACCGTT
TATTTCGAAA ACATTTACAG CGCCAACCAG GACCACCGCG AGCAGAATGT GCTGCACAAG
GCTGCACCAT TCACCGTGTC GCAAATGCCG GCCATTGAAG CGAAATACTT CCATCTGGGA
CCTTTGCTTT CGGACGACAT TACCGTGGAC CTTATTAAAA TGCTGGCCGC AAAAGGCAAG
GTTTCGCTCG ACATTCAGGG TTACCTGCGC TATGTGAAAG ACCAGAAGGT GCTTTACAAG
GATTGGGAAG ATAAAAAAGA AGCATTGCCT TACATCGACA TCCTCAAAGC CAACGAGTTC
GAGATGGAGG TAGTTGCTGG GACCAGCGAC GTGATCGAAG GTGCGAAATA CCTCGCCGAT
CTGGGTGTGA AAGAAGTAAT CATCACCCTC GGCAGCAAAG GCTCTTTGAT TTACAAAGAC
AACCATTTTT ACCAGATACC AGCCTACAAA CCGACCGATG TAGTGGACGC CACCGGCTGC
GGCGACACCT ATATGGCGGG CTACCTCAGT CAGCGCGTAC AAGGTGCGGG CGTGCAGGAA
GCAGGGGAGT TCGGGGCGGC GATGGCCACG CTGAAAATCC AGTCGTCGGG GCCGTTCTCG
GGTAATGCCG GTGATGTGCA CGAAGTATTG CAGTACGGCG AATGCGACCG TGAAGTGATC
GCGCAAGCCA TTTTATTATA A
 
Protein sequence
MKSTMYDICT IGHITLDKVV TAQSVKYMPG GTSFYFSKAL RQFDVRYMLV TALAEKEAHV 
VAGLREENIE VFSQNSPYTV YFENIYSANQ DHREQNVLHK AAPFTVSQMP AIEAKYFHLG
PLLSDDITVD LIKMLAAKGK VSLDIQGYLR YVKDQKVLYK DWEDKKEALP YIDILKANEF
EMEVVAGTSD VIEGAKYLAD LGVKEVIITL GSKGSLIYKD NHFYQIPAYK PTDVVDATGC
GDTYMAGYLS QRVQGAGVQE AGEFGAAMAT LKIQSSGPFS GNAGDVHEVL QYGECDREVI
AQAILL