Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2527 |
Symbol | |
ID | 8226099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3112238 |
End bp | 3116539 |
Gene Length | 4302 bp |
Protein Length | 1433 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644930359 |
Product | FG-GAP repeat protein |
Protein accession | YP_003086910 |
Protein GI | 255036289 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000205902 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAA AGGATTTACT AAAAATTGTC TTTGCGTTGT TTCTGGTGAC TTTTTTTGCC GGGAAGATAA ATAGGGAAAC GGCTCCCCCG CCTCCAAAAG GTAAGGAGGT AGCACAGCCA CACCTTACGC CGAAAAAGGA GCTAGAAGGA AGCAATGTCG ACAACGCGAA GATCATGCAA ATCATCTCCG AGCGCGAATA TCATATTACA AAGGATGCCC AGGGACGTCT CCAGAGCCCG AACCGCGAGC AGAATCTCCG GGCATACTAT AAGCCGGGAA GATTGACTAT CGAAAATCGC CGGGCCGACG CGGGAAATCA TTTCAGCCTA CAATTAATTA ATAAGGGAAT TTATGCCGAT GGCGAAAAGC TGTACACGCC GGAGATAAAT GCTGCGCAGG AGCCTTCATC CAATGAGTTG AAAATCGCAC ATGGCGCTTT TACGGAGGAA TTTATTAATA CGAAGGAAGG GATCAGGCAG AATTTTGTGA TCCACAGGGC TCCGAAGGGA ACCAAGCATC TTGCGGCGCA TCTTCGTGCC GAAGGTCTGG AAGTAGAGGA TCGCGGGAAC GATGAACTGC GCCTTTATGC AAACAGCGGC GGTGAAAAAC GTCTTCGATT GATTTATAAT GATATTCACT GCTGGGATGC TAACGGAAAG GTGCTGGAAT CATCGCTTGG TTTTCGGGAC GGGGAAATTG TTCTGGATGT GAATGCAGCA GAGGCAGACT ACCCGGTCAC AATCGATCCT ATTATTGCCA ACGGAAATCC CGGTAATGCT GCCGCAACGG TGCAGGGCGA CCAGAGCGCC GCGGGATTGG GCTGTTCCGT GTCCAGTGCA GGCGATGTGA ACGGTGATGG TTACAGCGAT GTCGTGGCTG GGGCCTACGC TTATGATAAT AGTGAAGCAA ATGAAGGGGT CGCGTTTGTT TTCCACGGAT CTGCCGCTGG AATTTCGTCG ACGCCCGCCA TTATTCTGGA AGCCAACCAG GCAGGCGCGC AGTTTGGATT TTCGGTAGCG GGGGCGGGGG ATGTGAACAA CGATGGTTTC AGTGATGTGG TGATCGGTGC ACCCAAATAT TCGAATGTTG AGGTGGAAGA GGGAGCGGCG TTCGTTTATT ATGGATCGTT GTCCGGCTTG TCGCAATCGT CGGTAACGGT CCTGGAATCG GGTCAGGATA ATGCGAATAG CGGCTATTCT GTCGCGACAG GCGGTGATGT AAACCGGGAT GGATTCAGCG ATGTGCTCGT AGGGGCTCCA TTTTTTGATA TGGGTGAAGA CAATGAAGGT GTTATTTTCG TATACAATGG TTCCGGAACC GGCGTAGCTA ATGTTGCGGT GAGTTTCGGG CAAAGCAATT TTGCAGGAGG AATGCTTGGA TTTTCCGTCG CTTGTGCGGG TGATGTGAAC GGCGATGGAT ACAGTGATGT GATAGCCGGG GCGCTTGGTT ATGAGGATCA GGCGGTGTCC AATACAACCG GTGCTGCATT TATTTACCAT GGTTCGGCAA TCGGATTTTC TTTTAATAAA AAACTATGGG CCAATACGGA TGCCAATATG GGATTCTCGG TAGCAGGAGC AGGTGATGTG AATGGCGATG GATACAGCGA TGTGGTCGTA GGCGCGAACA AACACCGGGA AGACGATGGA GCTGCGTATG TATTCCATGG TTCGGCTGTC GGAGTAAATT CCACGATTGC GACCACACTC ACGATCGTGG ATTCCGACTC GCAAATGGGC AATTCGGTTG CTTGCGCGGG TGATGTCAAT GGTGATAATT TTAGCGATAT CATCGTAGGT GCACCGAAGT TTTCGGACGG ACAAAGCCTC GAAGGTGCCG CATTCATCTA CCAGGGCTCG CTTGCAGGGG TAAATGATGT GGCGGTATCT ACAATCCAGG GAAACCAGGC TTCTGCAAGT ATGGGTTTCT CGGTAGCAAG CGCTGGTGAT GTAAATGGGG ATGGTTACAG CGACGTTTTC GTAGGTGCTT ACACGTATGA TTTGGGCCAA ACTACCGAGG GGTGTGCATT TGTGTATCAC GGTTCGGCCG CCAGCTCCGC TACTGCATTC AAGATTACGA AGGAAATGAA TCAAGCAGAT GCATCCTTTG GCTATTCGGT GGCCAGTGCC GGGGATGTGA ACGGGGACGG TTTCAGCGAT GTAATAGTAG GTGCACCGCT ATTCGATCAG GGCGAGGTGG ATGAAGGCGC CGTTTTTGTA TTTCATGGAA GTATTTCAGG TTTGTTGTTC GTCGGCGGAA GCTTTGAGGG AAACCAGCAG GGTGCGCGAA TGGGTTTCTC GGTAAGCTGT GCAGGTGACA TGAATGGTGA TGGCTTCAGC GATGTGATCG TGGGGGCGCC GGTCTATAAT AATGGAGAGG CAAACGAGGG TGCAGCATTC ATCTTTAAAG GGGATGCCAC AGGCGTCAGC TTTGGTTGGT GGCAATTGAT TTTGGATGCT GATCAGGAGG ATGCTCGTTT TGGTTATTCG GTTGCTGGAA CCAGTGATGT GAATGGCGAC GGGTACAGCG ATGTGATCGT GGGTGCGATA TTGTACGATC ACGACCAAAT TGATGAAGGA GCGGCATTTG TCTACTACGG CTCTTCGCAA GGTATTGACC TTTCTCCCAG CGAGCCCATT AATCACGATC AGTCAGGTTC TATCATGGGA TACGCTGTAA ATGGTGCGGG AGATTTAAAT GGCGATGGTT ATAGTGACGT AATTGTAAGC GCGCCCGGAT ATACGCAAAC CCAGGATGGT GAGGGAATAG TGTTCGTTTA CTACGGTTCG CCAACTGGGA TCAATTACAA TACGAGCCAG TCATTTGTGG GAAATCAATT ACAGGCTAAC CTGGGCTCCG CCGTGAGTGG AGCAGGAGAT GTGAATGGCG ACGGTTTCGG CGATATTGTG ATCGGTGCAG TAGGGTATTT TAATGGAGAA CTCAACGAAG GAGCGGCACT CATCTACCAT GGTTCCGCTG CCGGTGTGGG CAAGGACCCT ACTATAATTT TAGACAATAA CCAAAGCGAT TCTCGCATGG GCTACGCGGC CGCGAGCGCG GGAGATGTGA ACGGTGATGG TTACAGCGAT ATCATTGTGG GAGCCTACGC CTACAACTTC GGCAATGGCG AAGAGGGTGT TGCTTTTGTG TACCACGGCT CGCCAACAGC CATGGACGCG CATGCCGAAG CGACCATAAG GTTAAATCAG GTAGGAGCCC AGTTTGGCTT TGCGGCAGCC GGTGCAGGTG ACGTGAATGG CGACGGATAC AGTGATGTGA TCATCGGTGG ACGTCATTAC GTGAATGGAC AAAACAATGA GGGAGGTGCA TTTGTATATC TTGGCAATCA AGGCAATGCG GCGGGTACCC GCAACAACCT GCTCCTGTAC AACCCCGACC TCGTCAATCT GATCGATCAC AGTACCGTTG CCAAGGCCGA GTTTGGAATC GGATTGCGGG AGAAGTCGTT TTTGGGACGG ACGAACGCTA AGCTGGTCTG GGAGTCCGGG AAGGAGGGAG AGAGCTTTTC GAACGTGCCG ATCACAAACA GCACGCAGTT TACGGGGCAA AATGCGGGTT ACACGGACCT GGGTACCTTA GGTATTCAGC TAATGGACAT CGTTGTCAAA CAAGGCAAAG CGACGAAGGT CCGCGCCAGA ACCAAATATG ATCCCGTTAC AGCCATTACC GGCCAAATGT ACAGCCCGTG GCGGTATATT GTCACCTTGT CGTCCGGCGG GAGTGTGAAT GAGGGGACGC CGCTTCCTGT GACCCTGGTG AGCTTTGTGG CCAGGGCGGT AGAAAAGCAG GTGGATCTCG AATGGGTCAC TTCGTCGGAA ATCGATAGCA AAAGCTTTGA AATTCAGAGA AGCGTTGATG GGAAAAGCTG GATGACTATC GGTGAAGTAG CAGCGAGGAA TGAGGCTAAC GGGGAGAATC GGTACAATTT TGCTGATGGC CAACCGGTTT CAGGAAAGAA TTACTACCGG TTGAAAATGG TGGACATTGA TCTCAGCTAT GCTTTCAGCA GCATTCAGTC CGTGACATTT GATGGGCTCG CAGGCGCCTC GGTGACCGTT TATCCCAATC CAGCATCGCA TCAGATACAA ATCCAGGGCA ATCCCGAAGG CGTTTCTGCA TTGCAGCTTG TCAATGCGGC GGGGCAGATC TTTTTCGAAA GCGGCAAGTT TACGCCCGAA TTGAATGTGG AGAAACTGCC GGCAGGAACC TATCTGCTTG TGATTTCTTA TCAGGATGGG CGACGGGAGT CGGTGAAAAT TGCATTGAAT AAAGACCTGT AA
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Protein sequence | MEKKDLLKIV FALFLVTFFA GKINRETAPP PPKGKEVAQP HLTPKKELEG SNVDNAKIMQ IISEREYHIT KDAQGRLQSP NREQNLRAYY KPGRLTIENR RADAGNHFSL QLINKGIYAD GEKLYTPEIN AAQEPSSNEL KIAHGAFTEE FINTKEGIRQ NFVIHRAPKG TKHLAAHLRA EGLEVEDRGN DELRLYANSG GEKRLRLIYN DIHCWDANGK VLESSLGFRD GEIVLDVNAA EADYPVTIDP IIANGNPGNA AATVQGDQSA AGLGCSVSSA GDVNGDGYSD VVAGAYAYDN SEANEGVAFV FHGSAAGISS TPAIILEANQ AGAQFGFSVA GAGDVNNDGF SDVVIGAPKY SNVEVEEGAA FVYYGSLSGL SQSSVTVLES GQDNANSGYS VATGGDVNRD GFSDVLVGAP FFDMGEDNEG VIFVYNGSGT GVANVAVSFG QSNFAGGMLG FSVACAGDVN GDGYSDVIAG ALGYEDQAVS NTTGAAFIYH GSAIGFSFNK KLWANTDANM GFSVAGAGDV NGDGYSDVVV GANKHREDDG AAYVFHGSAV GVNSTIATTL TIVDSDSQMG NSVACAGDVN GDNFSDIIVG APKFSDGQSL EGAAFIYQGS LAGVNDVAVS TIQGNQASAS MGFSVASAGD VNGDGYSDVF VGAYTYDLGQ TTEGCAFVYH GSAASSATAF KITKEMNQAD ASFGYSVASA GDVNGDGFSD VIVGAPLFDQ GEVDEGAVFV FHGSISGLLF VGGSFEGNQQ GARMGFSVSC AGDMNGDGFS DVIVGAPVYN NGEANEGAAF IFKGDATGVS FGWWQLILDA DQEDARFGYS VAGTSDVNGD GYSDVIVGAI LYDHDQIDEG AAFVYYGSSQ GIDLSPSEPI NHDQSGSIMG YAVNGAGDLN GDGYSDVIVS APGYTQTQDG EGIVFVYYGS PTGINYNTSQ SFVGNQLQAN LGSAVSGAGD VNGDGFGDIV IGAVGYFNGE LNEGAALIYH GSAAGVGKDP TIILDNNQSD SRMGYAAASA GDVNGDGYSD IIVGAYAYNF GNGEEGVAFV YHGSPTAMDA HAEATIRLNQ VGAQFGFAAA GAGDVNGDGY SDVIIGGRHY VNGQNNEGGA FVYLGNQGNA AGTRNNLLLY NPDLVNLIDH STVAKAEFGI GLREKSFLGR TNAKLVWESG KEGESFSNVP ITNSTQFTGQ NAGYTDLGTL GIQLMDIVVK QGKATKVRAR TKYDPVTAIT GQMYSPWRYI VTLSSGGSVN EGTPLPVTLV SFVARAVEKQ VDLEWVTSSE IDSKSFEIQR SVDGKSWMTI GEVAARNEAN GENRYNFADG QPVSGKNYYR LKMVDIDLSY AFSSIQSVTF DGLAGASVTV YPNPASHQIQ IQGNPEGVSA LQLVNAAGQI FFESGKFTPE LNVEKLPAGT YLLVISYQDG RRESVKIALN KDL
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