| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2525 |
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| Symbol | |
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| ID | 8226097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3109497 |
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| End bp | 3111854 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644930357 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003086908 |
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| Protein GI | 255036287 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.985854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCA AGTTCTCTGC CGAATCGCTC GATATGGTCA TTTCCGGGAT CAACGCCGGG
ATATGGGACT GGGATTTCAA CACGGGCAAA CAAGTGTGGT CCGACCGGTT TTTCGAACTT
CTGGGCTACC AGCCGGGCGA AATTCCGACT GGCTATGAAT CATTTACGCA AAAACTGGTA
CATCCAGAAG ACAAAAGTAT CGTCGCCGAT GCCATACGCG AACAGCTCGA AAACAATGTA
CCGTATCTGG TACATGTAAG ACTAAAAACC AAAAATAACG ATTACCGCTA TTTCGAATGC
CGTGGAAATG TGCGGTTTGA AAACGGCAAA CCCGAACGAA TGGTGGGTTC TGTCAGCGAT
ATTCATGACA ATATGATGCA AAAAGAACAA CCCGGCAAAC TCGATGGCGT TTTGCAGGAC
CTCACCCAGC GAAAACTGGT GGAAGAAAAA CTCAGTGTAA TCTTTCAATA TTCCACCGAT
GCGCATTTAC TATTGGACGA AAGCGGGATT ACGGATTGCA ACGAGGCGGC CGTCAAAATG
CTGAAATGCA AAAATAAAAG TGAATTGCTT TCTATTCATC CGGCGCGGTT TTCGCCCGAA
TTCCAGCCTG ATGGCCGGCG TTCCTCCGAA AAATCCATTG AAATGGACCG GCTCGCCTAT
GAAAACGGAT ACAATCGTTT TGAATGGGTC CATAAGCGAA TGGATGGCGA GGAATTCCCC
GTTGAAGTGA CCCTGAATCC GGTCATGATC AGCAGCAAAA AGGTGCTCCT GGTTGTCTGG
CACGACATTA CGCACCGCAA AAGGGCCGAG GAACTGATCC GTCGGAACGA AGCCATGCTC
GCCGAGTCCC AGCAGCTCAC GCACAGCGGC AGTTGGGAGG CCGATCTCAT TACGGGCCAG
AATTATTGGT CGGACGAAGC ATTCCGCATT TTCGGCCTTG AACCCGGGAG CGCCGGGCCG
GAAACCGAGC TTTTCTCTAA AATGATCCAT CCCGACGATA TGCTTCTTTA CAAATCGCAT
ATCCGCGACG CGATCAATGA ACTGAAACCG GCCAGTTTCC ATCTGCGGAT CGTTTTACCC
GATGGCCGCG TAAAATTCAT CCATGCGATC GGCAAGCCGC TGATCGATTC CGGTGGCAGG
GTGACGAAGC TTTACGGCGC CATTATGGAC ATCGACGAGC AGAAAAAAGC CGAGCAGGAG
CTGATCAAAG CAAAGGAACA GGCTGAAATG GCCGCCGTTG CCAAGTCACA ATTCCTTTCG
ACGATGAGCC ACGAGATCCG AACGCCCATG AACGCGGTGA TTGGTTTTAC CCATTTGCTT
TTGCAGCAAG ACCCCAAACC TGAGCAAATG GAGTATCTGA ACATTCTAAA ATTCTCGGCA
GAAAACCTCC TGGTACTGAT CAACGACATT CTGGATTTCA GCAAGATCGA AGCCGGCAAA
ATTGAGTTTG AGGAAGTTGA TTTCAATGTA CTCGCGTTGC TTGAAAACAT CCGTTCGGGT
GTGCTGCAAA AGGCCAACGA AAAGGGCATT ATGTTGAAAC TGAAAGTGAG TAATGATGTC
AATATCATGG TGGTGGGCGA CCCTACGCGG CTGGGACAAA TACTGACGAA TCTGGTCAGC
AATGCGGTAA AATTCACTGA AAGCGGCAAA GTCACCATTT CCGCAGCGGT ATCGGCACGT
GCGGATAAAC ATGTCACGAT CGACTTTCGT GTAGAGGATA CCGGTATCGG CATCCCGCCC
GAAAAACTGG AAAACATCTT CGACAGTTTT ACGCAGGCCA CATCCGACAC AACCCGGAAA
TACGGCGGCT CCGGGCTGGG TCTGACGATC ACTAAACGCC TACTGGAACT TCAAAAAAGC
AACATCCACG TCGACAGCGA GCAGGGCAAC GGCTCTGCGT TCTATTTCAG CCTGTCATTC
CCGATCAGCG AAAAGCACCT CACCGAACTC GCCAACGGAG CACCCGCCAA TCATTTCGAC
TTGCAGGGCA TGAAACTGCT CATCGTGGAA GACAATAATA TAAATGTCTT GCTGATGAAA
AATTTCATGA AGCAATGGAA TGTACAATAT GACCTCGCCG AAAACGGCCG CGTAGCACTC
GAAAAAGTAC AGGCAAACGA CTACGATCTC GTTCTGATGG ACCTTCAAAT GCCCGAAATG
GACGGTTACG AAGCGACTCA CCATATCCGC CATCTTCCGG GCGAGAAATA CAGGCAATTA
CCCATTATCG CACTCACGGC TTCGGCCATG ATGGATATTA AGGACATCGC GTTCACCGTC
GGCATGAACG ATTACATCAG CAAGCCGTTC AGCCCGGCCG AGTTGTATGC CAAAATCGCC
TCTTACCGAA ACAGGTAA
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| Protein sequence | MPSKFSAESL DMVISGINAG IWDWDFNTGK QVWSDRFFEL LGYQPGEIPT GYESFTQKLV
HPEDKSIVAD AIREQLENNV PYLVHVRLKT KNNDYRYFEC RGNVRFENGK PERMVGSVSD
IHDNMMQKEQ PGKLDGVLQD LTQRKLVEEK LSVIFQYSTD AHLLLDESGI TDCNEAAVKM
LKCKNKSELL SIHPARFSPE FQPDGRRSSE KSIEMDRLAY ENGYNRFEWV HKRMDGEEFP
VEVTLNPVMI SSKKVLLVVW HDITHRKRAE ELIRRNEAML AESQQLTHSG SWEADLITGQ
NYWSDEAFRI FGLEPGSAGP ETELFSKMIH PDDMLLYKSH IRDAINELKP ASFHLRIVLP
DGRVKFIHAI GKPLIDSGGR VTKLYGAIMD IDEQKKAEQE LIKAKEQAEM AAVAKSQFLS
TMSHEIRTPM NAVIGFTHLL LQQDPKPEQM EYLNILKFSA ENLLVLINDI LDFSKIEAGK
IEFEEVDFNV LALLENIRSG VLQKANEKGI MLKLKVSNDV NIMVVGDPTR LGQILTNLVS
NAVKFTESGK VTISAAVSAR ADKHVTIDFR VEDTGIGIPP EKLENIFDSF TQATSDTTRK
YGGSGLGLTI TKRLLELQKS NIHVDSEQGN GSAFYFSLSF PISEKHLTEL ANGAPANHFD
LQGMKLLIVE DNNINVLLMK NFMKQWNVQY DLAENGRVAL EKVQANDYDL VLMDLQMPEM
DGYEATHHIR HLPGEKYRQL PIIALTASAM MDIKDIAFTV GMNDYISKPF SPAELYAKIA
SYRNR
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