| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2515 |
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| Symbol | |
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| ID | 8226087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3094619 |
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| End bp | 3095947 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930347 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003086898 |
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| Protein GI | 255036277 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAACG AAGCATCACA AACTTTAAGA CTAGCATTCC CAATTATCAT CGGAGAACTG
GCCCAAATGG CCCTCCACCT CATCGACAGC GCGATGGTCG GCGCGATCAG TTACAAGCAA
CTCGCCGCAG CGGCGCTGGT GATCAATGCA ATGAACATCC CGTTCGTGAT CGGGATCGGC
ATGACGATCT CCGTGTCACA AATGGTGTCG CTCGCCAACG GCCGCCGCGA TGCCCAGCAG
GTTTCACATT ACCTATTCAA TGGCTTTTGC CTCTGCACGC TCACGGCGCT GGCCATTTCG
ATTACATTGC TTTTCGGAAA AGATTACCTG CGTAACCTCG GCCAGGACCC CGAGGTGGTG
GAACTCGCGA TCCCTTTCAT GCGACTTATG GGCCTTTCCA TTATCCCGAT GCTGCTTTTC
ATGACCTTGA AGCAGTTTGC CGACGGCCTG GAACACACGC GCACGGCGAT GATCTTCTCG
CTGGCCGGCA TGCCGATTAA CATTGTCCTC AACTGGCTGC TCATTTACGG TAACTGGGGC
TTCCCGCGGC TGGAACTGGA AGGCGCCGGC TGGGCGACAC TCATCACCCG GAGCATGATG
TTCCTCGCCA TGCTTTATGT GATTTTGAGA CATAAAATTT TTGAAAAATA CATAGCCGTA
AGCCGTAACC AGTGGTATTT TAAAGGAAAA ACCTGGCGGG AACTGTTGCA CATCGGCGTG
CCGAGCAGCT TGCAGATCGG CATGGAAGCG GGCGCATTCG CGGTATCGGG CATTATCATC
GGTACATTGG GCGCTGTGGC GCAGGCAGCG CACCAGATCG CACTGAGCAG CGCCTCGTTT
ACATTCATGG TGTCGATGGG CCTCGCGCAG GCGGGTTCCA TCCGCGTGAG CAACGCGCTC
GGGCGCAGCG ATTGGGGCAA GATCTTTGTG ATCGGCAAAA GCACCATCAT CACCGCATTG
ATTTACGGCA CCATCTGCGC AATCAGTTTC GGTTTGCTCC GGAATGTGCT TCCTTTGGCG
TTCAACAAAA ACGAGGAAGT GCTTGCGCTT GCTGCGTTGC TGCTGCTTTT TGCCGCTGTT
TTTCAGATTT CGGACAGCAC CCAGGCCATC GGTGCGGGCT TGTTAAGAGG AATTAAAGAT
GTAAAAACGC CCACGGTACT GATCGGGATC GCCTATTGGG TAATCGGCAT TCCGGTTGGG
TACACCCTCG CTTTCCATTT TAACATGGGC GCTTACGGCA TGTGGCTAGG GCTGATATTA
GGGTTGACAA TGGCCTCTAT TTTCCTCATT ACCCGCTTCT TCAAGATGAC GAAAAGAAAT
CAGGTTTAG
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| Protein sequence | MKNEASQTLR LAFPIIIGEL AQMALHLIDS AMVGAISYKQ LAAAALVINA MNIPFVIGIG
MTISVSQMVS LANGRRDAQQ VSHYLFNGFC LCTLTALAIS ITLLFGKDYL RNLGQDPEVV
ELAIPFMRLM GLSIIPMLLF MTLKQFADGL EHTRTAMIFS LAGMPINIVL NWLLIYGNWG
FPRLELEGAG WATLITRSMM FLAMLYVILR HKIFEKYIAV SRNQWYFKGK TWRELLHIGV
PSSLQIGMEA GAFAVSGIII GTLGAVAQAA HQIALSSASF TFMVSMGLAQ AGSIRVSNAL
GRSDWGKIFV IGKSTIITAL IYGTICAISF GLLRNVLPLA FNKNEEVLAL AALLLLFAAV
FQISDSTQAI GAGLLRGIKD VKTPTVLIGI AYWVIGIPVG YTLAFHFNMG AYGMWLGLIL
GLTMASIFLI TRFFKMTKRN QV
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