Gene Dfer_2509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2509 
Symbol 
ID8226081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3085579 
End bp3087819 
Gene Length2241 bp 
Protein Length746 aa 
Translation table11 
GC content50% 
IMG OID644930341 
Productprotein of unknown function DUF893 YccS/YhfK 
Protein accessionYP_003086892 
Protein GI255036271 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID[TIGR01666] hypothetical membrane protein, TIGR01666 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000184796 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.83989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACC TCGACGAGTT CAAAAAGTTT ATTTCCAGCC ATTACCTGTC GACCGGTGTA 
CGTCTAACCC TCGGAACGAT CATTCCCAGC GTCATTTTTC ACCATTACGG CATCCTGAGC
GAAATGATCG CATTTCCGCT CGGCACACTG CTGATCGGCG GCACCGATAA TCCGGGGCCC
TATCATCGCC GCCGCAATGC ATTGCTTGTC GCTATTGCCA CCTGTTTTGT CGTGGCCTGC
GTTACCGGCT ATCTGCGGCA TTTTCCACTG ATCATTTTTC TCGAAATCAT CGTGTTTGGG
ATGTTTTTTT CGCTGGTGGG CGTGTACGGC AACCGCGTTA ACAGCATCGG GCTCATTTCG
CTGCTTGTTT TTGTATTTAA TATCGACGAT CACCTGAGCG GCGACATGGT GCTCCGCACG
GCGGCCATTT TCTCTGCCGG CGGCATCTGG TATTTCATAT TGTTTATGGT GTTGCAAAAA
CTCCTGCCCT ACAAGCTCAT TCAGCAGCTG CTGGGCGAGA ATTTTGTGGA GTTGGGTAAA
TTGCTGTCTA TCAAGGCCGA CTATTATTTT GCCAATCCCA ACTATGACGA GCTATTTAAC
AGAATGATAC ACCAGCAGGT GATCCTCCGT GAAAATCACG AAAACCTGCG TGAAATCCTC
TTCAAAACCC GCGAGATCGT GACGGAGTCC ACTACCAAGA GCCGCATTCT GATGCTGATG
TTCCTGGATA GCATCGACCT CTTTGAACGC ATTCTCAACT CGCAGCAAAA CTATGCGAAC
CTGCACCGGG CATTCGACCA CACGAAGGTG CTGCGGCTGT TTGGGACCTA CATTACCTGG
CTTGCGGCCG AAATACAGCA GATTGGCCTG GCCGTGCAGA GCGGGTACGC GTCGCATCCG
CGGCATGACC TCGACGAGGC GTTCAACAAG TGTCAGCGTG CTTTCGAGCG TATGCGCGAG
CACAAGATGA ACCACGACAA TATGGAGGAT TTCATCATGC TCCGGCAGAT TCTCAACAGC
TTGCAGGACG TGACCGAGCG GGTGAAAAAG CTACACCGCG CTACCAAATA CGAGGCCGAT
GCCACTAGTG ACTACAAATT GACGGTCGAA GCGGAAGATT TTACGCCCAA GCAGGATTAC
CACCCGCGCA TTCTGCTGGA TAACCTTTCA TTGAAATCCA GTCATTTCCG TCATGCCGTG
CGCGTAACGC TCGGCTTGCT GGCAGGCTAT ATTGCGTCGT TGTTTTTCGC TGTGGGGCAC
GGGTACTGGA TTTTGCTGAC GATCGCGGTG ATCCTGAAAC CGGCATTTAG CATTACCAAG
CAACGAAACC TTCACCGGAT CGGGGGAACG ATGCTTGGCG TGGTGGTAGG ATTCCTGTTT
TTATACCTGA TTGAAGAGAA AACACCGCTG TTCATCCTCA TGATGGTATC GATGATTCTC
GCTTACAGCT TCCTGAAAAT CAATTACTTT GTGGCGTCTA CGAGCATCAC CTTGTACGTA
ATTCTCTCAT TCCATTTCCT CAGTCCGCAG CATGTGACGG ATGTTTTGCA GGACCGGGTG
ATTGATACGG TGATCGGCTC GGTGATTGCC TACATTATTT CTTCCTACGT GCTGCCCGTG
TGGGAGCATT CGCAGATTAA GCAATACATG AAAGAAGCGC TGAACGCCAA CCGGAAATAT
TTTGATATAG TAGCCGCCAA ATTCACCGGC AAACAATTGG ATATCAACGA ATTGAAATTA
CTGCGCAAGA ATGCGATCAT CGCGATGGCG AATCTTTCGG ATAACTTCCA GAAAATGCTT
TCGGAACCGA AAAAGCAGCA GATGAATATG GAAGAATACC ACCAGTTTGT CGCGACGAGC
CATATGCTTA CGTCCTACAT CGCCTCGCTG TCCACGTATG CGCAAACGCT GGAATATTCC
GAGTTTTCGG TGGAATTTGA ATTGATGATC CGGCAGATCG ACCGGCAGTT GCAGGCCGCT
ACGGACATTA TCGACGGCAA AACCGGCAAC AGCCTCGAAA TTGTGCGCGA ATCGCTGCCG
CAGAATCAGC GACTGGTGGA GTTGCTCACA AAACGCAAAA AGGAAATCAA GGAGCTCGGC
ATCGAGCGGG CCGATCAGTC GCCGGCGCGC AAAATGCTGT CCGATCTGAA AACGATCAAT
GGCCTTTTCG AGCTGATCAG CACCATTTCC ATTGACGAAA TTAAGATACT TCAAAAAATA
AAACCCGCGA AAGCCGCCTG A
 
Protein sequence
MNYLDEFKKF ISSHYLSTGV RLTLGTIIPS VIFHHYGILS EMIAFPLGTL LIGGTDNPGP 
YHRRRNALLV AIATCFVVAC VTGYLRHFPL IIFLEIIVFG MFFSLVGVYG NRVNSIGLIS
LLVFVFNIDD HLSGDMVLRT AAIFSAGGIW YFILFMVLQK LLPYKLIQQL LGENFVELGK
LLSIKADYYF ANPNYDELFN RMIHQQVILR ENHENLREIL FKTREIVTES TTKSRILMLM
FLDSIDLFER ILNSQQNYAN LHRAFDHTKV LRLFGTYITW LAAEIQQIGL AVQSGYASHP
RHDLDEAFNK CQRAFERMRE HKMNHDNMED FIMLRQILNS LQDVTERVKK LHRATKYEAD
ATSDYKLTVE AEDFTPKQDY HPRILLDNLS LKSSHFRHAV RVTLGLLAGY IASLFFAVGH
GYWILLTIAV ILKPAFSITK QRNLHRIGGT MLGVVVGFLF LYLIEEKTPL FILMMVSMIL
AYSFLKINYF VASTSITLYV ILSFHFLSPQ HVTDVLQDRV IDTVIGSVIA YIISSYVLPV
WEHSQIKQYM KEALNANRKY FDIVAAKFTG KQLDINELKL LRKNAIIAMA NLSDNFQKML
SEPKKQQMNM EEYHQFVATS HMLTSYIASL STYAQTLEYS EFSVEFELMI RQIDRQLQAA
TDIIDGKTGN SLEIVRESLP QNQRLVELLT KRKKEIKELG IERADQSPAR KMLSDLKTIN
GLFELISTIS IDEIKILQKI KPAKAA