| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2499 |
|---|
| Symbol | |
|---|
| ID | 8226071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 3076352 |
|---|
| End bp | 3077725 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644930331 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_003086882 |
|---|
| Protein GI | 255036261 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.818045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA ATAAATGGAT CGGGGCTCAT CTGGCAGCCA TTTTCATGCT GCTATGCAGC
GTGGTGAGCT TCGGGCAAGG TCAGCAGGGA GTGAGCCTGG ACAAGATTAT CGCGAGGGTC
GATAACCACT ACATCCTCAG TTCGGAACTG GAAGACATGT ACAACCAGTA CAAAGCCGAA
GGAAGAGGCG CTCCCGAGAA ATGCCAGCTG CTCGAATCCC TGATTATCAA CAAAATGCTC
CTTGCAAAAG CCGAAATCGA CTCTGTAACG GTGGAAGACA AGGAAGTAGA CGGCGAACTG
AACGCGAAGA TGAACTACAT GGTGCAGCGT TTCGGTTCGG AAAAAAACAT TGTGGAGGCT
TACGGAAAAA GCATTGAAAA CCTGAAAGGC GAGCTGCGTC AGCAGGTGAA AGAGCAAAAG
ATCGTCGAGA AAATGCAGCG TACAATCTCG GGTAATGTCA AAATCACCCC TGCCGATGTA
CGCAAGTTCT TCAACAGCAT TCCCAAAGAC AGCTTGCCTT ATATTCCTTC GGAAGTGGAG
GTGGGGCACA TTGTGAAAAA AGGCACGGTA ACCCGCGAGC AAAAGGAAAA ACTGCGTCAG
CAATTGCAGG AATTGAAGCA GCGTGCCGAA AAAGGCGAAG ATTTCGCAAT GCTTGCACAG
ATTTATTCCG AAGACCTTGG CTCGGCAAAA GTGGGCGGTG ACCTGGGCTT CGCGAAACGC
GGACAAATGG TGCCGGAATT CGAAGGCGCA GCGCTGGGGC TCAAACCCGG CGAAATGTCG
AACGTAATCG AATCGCAATT CGGTTTTCAC CTCATTAAAC TGATCGAAAC CCGCGGTGCG
GAATACCATG CACGGCACAT TCTGCTCCGG CCTGACTACA ACAAAGGCAC GGACATGACC
GACGCCACCC GCGCACTCGA CAGCCTCCGC GCGCTCATCA AAACCGATTC ATTGAAGTTT
GCCAAAGCGG CACTGGATAA TTCCGACGAC AAGGAAACGG CCGAATCGGG CGGACTTATC
CAGGACAGAA GCACCGGCCA GGCAAGACTG ACGCTTGACG CCTCAATGGA CCCCGCGCTG
TATTTCGCGA TCGATACCAT GAAAGTGGGC GACCTGAGCA TGCCGGTATC TTACCGCCTC
GAAGATGGCA GCAGCGCCAT GCGTATCCTT TGGTACAAAA GCAAATCGGA GCCGCACACC
GCTAACCTGC ACGACGATTA CGAAAAACTC GCCCAGATCG TGCTGAGCAA CAAACGGAAC
AATGCGCTGG AAGAATGGTT CAAAAAAGCG CAGGGCGACG TGTACATCAG CATCGAACCG
GAGTACAAAA ATTGTAAGGT ACTCGGGCTT GCCGCCAACG CGGACGATAT ATAG
|
|---|
| Protein sequence | MKVNKWIGAH LAAIFMLLCS VVSFGQGQQG VSLDKIIARV DNHYILSSEL EDMYNQYKAE
GRGAPEKCQL LESLIINKML LAKAEIDSVT VEDKEVDGEL NAKMNYMVQR FGSEKNIVEA
YGKSIENLKG ELRQQVKEQK IVEKMQRTIS GNVKITPADV RKFFNSIPKD SLPYIPSEVE
VGHIVKKGTV TREQKEKLRQ QLQELKQRAE KGEDFAMLAQ IYSEDLGSAK VGGDLGFAKR
GQMVPEFEGA ALGLKPGEMS NVIESQFGFH LIKLIETRGA EYHARHILLR PDYNKGTDMT
DATRALDSLR ALIKTDSLKF AKAALDNSDD KETAESGGLI QDRSTGQARL TLDASMDPAL
YFAIDTMKVG DLSMPVSYRL EDGSSAMRIL WYKSKSEPHT ANLHDDYEKL AQIVLSNKRN
NALEEWFKKA QGDVYISIEP EYKNCKVLGL AANADDI
|
|---|
| |