| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2494 |
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| Symbol | |
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| ID | 8226066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3069670 |
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| End bp | 3071388 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930326 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003086877 |
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| Protein GI | 255036256 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.314394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGA ACATAAAAGC AACAAAACAA GCCACTTACG ATGCGATAGT GGTGGGTTCG
GGAATAAGTG GCGGCTGGGC CGCAAAAGAG CTGACGGAGA AGGGTTTGAA AGTCCTGATG
CTGGAAAGAG GAAGGGATAT CAAACACATC GTCGACTACA AAACGGCGAC GCTCGCTCCG
TGGGAACTTG AACACCGCGG CCGCGTTACC ACCGTCGCAA AGGAAGAATA CTGGGCGGGA
ATACGCACTG GCTACACCGC GAACGAAGAG CACCGCTACC TGTTCGAAAA CGATAAGGAA
AATCCATACG AAGAAACACG CGGGTTCGAC TGGATCCGTG CCTACCACGT GGGTGGCCGC
TCGCTCCTGT GGGGACGCCA GAGCTACCGC CTCAATGCAG CGGATTTCGA AGCGAATGCC
AAGGAAGGCA TCGGCGTCGA CTGGCCGATC CGCTACGCCG ACATCGCGCC GTGGTACGAC
TATGTAGAGA AATTTGCAGG TATCAGCGGT GCCAAAGACG GCCTCGACGT GCTGCCCGAT
GGCAATTTCC TCCCGCCGAT GCAGATGAAC TGTGTTGAAA AACACGTAAA AGGAGAAGTA
GAGAAGAAAT TCCCCGGCCG CCATATCATC ATGGGCCGCG CGGCGCACCT TACCCAGCCG
CAGGCATTCC ATACCGAGCT CGGCCGCGCC GCGTGCCAGT TCCGTAATAT GTGTATGCGC
GGATGCCCAT ACGGCGGTTA TTTCAGCACG CAGGCTGCTA CATTGCCGGC AGCACAGAAA
ACCGGTAATC TGACCCTGAT CACGGATTCC ATCGTATCGG AAGTGATCTT CGACGACAAG
CTGAATAAAG CGACCGGCGT GCGGGTGATC AACCAGAATA CCATGGAAAC GAAGGAATAT
TTTGCCAAAA TCATATTCCT GAATGCTTCC GCCATCGCAT CCTCCTCGAT TTTGATGAAC
TCCAAATCGA AACGCTTCCC GAACGGAATG GGTAACGACA GCGACCAGCT TGGACGTAAC
ATCATGGACC ACCACCTGGC AGTAGGTGCA AGAGGAGATA TCGACGGATT CGAAGACAAA
TACTACTTCG GACGCCGCGC GAACGGTATC TACATTCCGC GCTACCGCAA CTGGGGCAAC
GATAAGCGCG ACTACGTGCG CGGATTCGGC TACCAGGGCG GTGCAAGCCG CGAAAGCTGG
GGCCGCGGTG TGGGTACCGA CGGTTTCGGG GCCGATTTCA AAAAGCAAAT TTCACAGCCC
GGCGCTTGGA GCATGAACAT CGGTGGTTTC GGCGAGATGA TTCCCGACGA GAAAAACCGT
TTCACATTGC ACCCGACGAG AAAAGACAAA TGGGGACTGC CCGTAGTCGT TTTCGATGCG
GCTTATGGTG AAAATGAAAA GAAAATGCGC CAGGATATGA TGAACGATGC CGCCGAAATG
CTCGAAGCGG CCGGTCTGAA GAACGTGACG CCTTATAACG ACGAATCGAA ACACCCGGGC
ATCGGTATCC ACGAAATGGG TACGGCGCGC ATGGGTAACG ACCCGAAAAC ATCTGTTTTG
AACAAAAACA ACCAGGTTTG GGGTGCGGAA AACGTATATG TTACCGACGG ATCTTTCATG
ACTTCGGCAT CCTGCGTGAA CCCGTCGCTG ACCTACATGG CTATGACCGC CCGCGCTGCG
GACCATGCCG TGAAGGAGCT CAAAAAGATG AACGTATAA
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| Protein sequence | MNLNIKATKQ ATYDAIVVGS GISGGWAAKE LTEKGLKVLM LERGRDIKHI VDYKTATLAP
WELEHRGRVT TVAKEEYWAG IRTGYTANEE HRYLFENDKE NPYEETRGFD WIRAYHVGGR
SLLWGRQSYR LNAADFEANA KEGIGVDWPI RYADIAPWYD YVEKFAGISG AKDGLDVLPD
GNFLPPMQMN CVEKHVKGEV EKKFPGRHII MGRAAHLTQP QAFHTELGRA ACQFRNMCMR
GCPYGGYFST QAATLPAAQK TGNLTLITDS IVSEVIFDDK LNKATGVRVI NQNTMETKEY
FAKIIFLNAS AIASSSILMN SKSKRFPNGM GNDSDQLGRN IMDHHLAVGA RGDIDGFEDK
YYFGRRANGI YIPRYRNWGN DKRDYVRGFG YQGGASRESW GRGVGTDGFG ADFKKQISQP
GAWSMNIGGF GEMIPDEKNR FTLHPTRKDK WGLPVVVFDA AYGENEKKMR QDMMNDAAEM
LEAAGLKNVT PYNDESKHPG IGIHEMGTAR MGNDPKTSVL NKNNQVWGAE NVYVTDGSFM
TSASCVNPSL TYMAMTARAA DHAVKELKKM NV
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