Gene Dfer_2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2490 
Symbol 
ID8226062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3065836 
End bp3067119 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content51% 
IMG OID644930322 
Producthistidine kinase 
Protein accessionYP_003086873 
Protein GI255036252 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.757093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCG AAACCCCAAA AGAAAAACCA CGTTTCAAGC TGCACCCCGT AGCCATCCTG 
AACAGCCAGC GCCTGCGCCG GTCACTGATG GATACTTACG ATCAGAAAAG CTTTTATAAA
TACGGGATCG GTCTCATTCT GCTGATCCTT AGCATCGGCT CATTGTTTTA CACCGACAAG
CTGGTGGAAG AGCTCGAAGA ACGGGAAGAA AGAGAGGTGC AGCTGTATGC CGAAGGTCTG
CGCTATGTCG TCAACAGCCC GCTCGATGAA AACTTCAATG TCGTTTATCA GGTGATCGAA
GACGCGGTGA ATTTTTACCA GATCCCTGCC ATTTACGTCG ACGAAAACAA CATTCCCAAC
CCCAACAAAA ACATTAAATT CCCCGAGAAA ATAAGCCGGC AGGAACGCGA GCGCATTATC
CAGGAAAGAT TGGAAGAAAT GAAGCTCGAA CACCCGCCTA TCCCGGTGGA GCTTGGCAAG
GGACGTGCCG GCAAAATCTA TTACAGCAAC TCCTTTTTGC TCACGCAGCT GCGGTATTAC
CCGTTTTTGC AGCTATCGGT CATGCTGCTG ATCGGCTACC TGGCCTATCT CGCATTCAGC
TCGGCAAGGA AAGCCGAACA GAACCGCGTG TGGGTGGGGC TGGCGAAAGA GACGGCGCAT
CAGCTAGGCA CGCCGCTTTC CTCGCTCATG GCATGGGTGG AGTATTTCCG CAGCGATCCG
TCCATTGACC CGTCCATTGC CGAAGAGATC GAAAAGGACG TGATCCGGCT TGAAATGATC
ACGACGCGCT TTTCCAACAT CGGCTCCGTA CCCACGCTCA GGCAGGAACC AATTGCGTTG
ATCGTCACGA ACTTTGTCAA TTACCTCGAA AAACGGGTCT CTTCCAAAGT CAAATTCGAA
GTGCATAACC AGCTTGCCGG TGAACAAACG GCATTGCTGA ACAAGAATTT GTTCGAATGG
GTGATCGAGA ATATCTGTAA GAATGCGGTG GATGCCATGG GCGGCATCGG CCAAATCCAC
GTGACGCTGC AAGCGCCGCC GCGTGCGAAG GAAATCTGGA TCGACATTGC CGATACCGGT
AAGGGAATGA ACAAAGCGCA GATCGGCAAG ATTTTCAACC CCGGGTTCAG TACCAAGAAG
CGCGGCTGGG GATTGGGGCT TACACTCGCC CAACGGATCA TTGAAAACTA CCACTCCGGG
AAACTGTTCG TCAAAAGCTC GGAGGTAGGA AAAGGAACGA CATTCAGGAT TACCCTGAAT
GCCGAAATTG TAGAAGAACC CTAA
 
Protein sequence
MISETPKEKP RFKLHPVAIL NSQRLRRSLM DTYDQKSFYK YGIGLILLIL SIGSLFYTDK 
LVEELEEREE REVQLYAEGL RYVVNSPLDE NFNVVYQVIE DAVNFYQIPA IYVDENNIPN
PNKNIKFPEK ISRQERERII QERLEEMKLE HPPIPVELGK GRAGKIYYSN SFLLTQLRYY
PFLQLSVMLL IGYLAYLAFS SARKAEQNRV WVGLAKETAH QLGTPLSSLM AWVEYFRSDP
SIDPSIAEEI EKDVIRLEMI TTRFSNIGSV PTLRQEPIAL IVTNFVNYLE KRVSSKVKFE
VHNQLAGEQT ALLNKNLFEW VIENICKNAV DAMGGIGQIH VTLQAPPRAK EIWIDIADTG
KGMNKAQIGK IFNPGFSTKK RGWGLGLTLA QRIIENYHSG KLFVKSSEVG KGTTFRITLN
AEIVEEP