| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2460 |
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| Symbol | |
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| ID | 8226032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3029800 |
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| End bp | 3031029 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644930292 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_003086843 |
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| Protein GI | 255036222 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGA TCGTTATCAC ACATCCCGAA ATGCTGCCCG GGGAAGCTGG GATCATTAAC
CAGCTTTTCC AAAGCGGCCT CGCACGCCTG CACCTGCGCA AGCCCGATGT GCCGAAGGAA
GTCGTGCAGG ATTTGCTGGA AAACATCACT CCCGCATTCC GGAACCGCAT TGCATTACAC
CAGCATCATG AGCTGGCGGA CGCATTCGGT ATTACGGGGC TACATTTCAC GGAGCGCGCG
CGCCTGGACG TTGCGCCTGA AACATGGAGC GCATTAAAAA GCAGGGCTTA CACGCTCAGC
ACGTCCCTGC ACGATCCCGC GCAACTCGAA ACGCTATCCC ACGACTTCGA CTACGCATTC
CTGGGGCCCG TTTTCGACAG CATTTCGAAA GTGGGCTACG CTGCGAAATT GCCTTCCGAT
TTTAAATTAA ACCCATTCAC CTTCCCGAAC AAGGTAATCG CGCTCGGAGG TATGGATGCC
GAAAACCTTG GCCTGGCGTC CCAAATGGGC TTTGCAGGCG CGGCGCTGCT CGGGGCCATC
TGGCAGAATC CGGAGCAGGC CGTCACCCGA TTTGCGCATT TGAAGTCGTT GCAGGTAGAA
CGGCCGTTTG TGGACCGCTT GCATTTCATA TCGAACGAAA CGCCGGATAT GTCGCACATC
GATAGCATCC GCCTGGCGCT GGAAGCCGGC TGCCGGTGGA TTCAACTTCG GGTGAAGCAC
CGGCCGGAAG CAGAAGTTTT GCCGATAGCC TGGGAAGCCA CCCGGCTGTG CGACGCTTAC
GGAGCGAGGC TCATTATCAA CGACTTTCCC CGCGTGGCAC TGGCGGTACA GGCTTACGGC
CTCCACCTCG GCCTCACCGA CATGCCCGTA CCCGAGGCCC GCGCGCTGGT AGGGAACAAA
ATCGTGGTGG GCGGAACGGC CAATAGCTGG GAGGACATTG AGCTGCGTAT CCGCGAAGGC
GCAGATTACA TCGGCCTCGG CCCGTTCCGT TTCACGAGCA CCAAAGAGAA CCTCAGCCCG
ATCCTGGGCG TGGAAGGCTA CGCGGCATTG ATGCAAAAAA TGGCCGACGC GGGGTTCAGC
AAGCCCATTA TCGCCATCGG CGGCGTTACG CCGGCCGACA TTCCCATAAT CCGTTCCACC
GGCATTTACG GCGTGGCCAT GTCCGCCGCA TTGACGGGCG CGACGGATCC GGCGGAAACT
TTTTACGAAA TCCAACAAGC ATTATGTTAA
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| Protein sequence | MELIVITHPE MLPGEAGIIN QLFQSGLARL HLRKPDVPKE VVQDLLENIT PAFRNRIALH
QHHELADAFG ITGLHFTERA RLDVAPETWS ALKSRAYTLS TSLHDPAQLE TLSHDFDYAF
LGPVFDSISK VGYAAKLPSD FKLNPFTFPN KVIALGGMDA ENLGLASQMG FAGAALLGAI
WQNPEQAVTR FAHLKSLQVE RPFVDRLHFI SNETPDMSHI DSIRLALEAG CRWIQLRVKH
RPEAEVLPIA WEATRLCDAY GARLIINDFP RVALAVQAYG LHLGLTDMPV PEARALVGNK
IVVGGTANSW EDIELRIREG ADYIGLGPFR FTSTKENLSP ILGVEGYAAL MQKMADAGFS
KPIIAIGGVT PADIPIIRST GIYGVAMSAA LTGATDPAET FYEIQQALC
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