| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2459 |
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| Symbol | |
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| ID | 8226031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3027908 |
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| End bp | 3029800 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644930291 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_003086842 |
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| Protein GI | 255036221 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG AGAAAACGCC GGAAACCATC ACCCGCGACC CATTCCCGAA TTCGAAGAAA
ATATATGTGA AAGGGCAAAT CCACGACATT TCCGTAGCAA TGCGCGAGAT TTCGCTGAAT
GATACCCGTA TACATGGCGG CCCGCGTCCC GGACGCCTGG GTGCCAGCGA GCCGAACGAG
CCGGTAACAG TTTACGACAC CAGCGGCGCC TACACCGATC CGAATATTGA TATAGACGTC
AAAAAAGGTC TTCCCGCATT GCGTGCAGCA TGGGTACGCC AGCGGGGCGA CGTGGAAGAG
CTGGAAACCA TCACTTCCGA ATACGGCCGA ATGCGCCTCG CCGATGCGAA GCTCGACCAT
TTGAGATTTG CCCACAATGC CAGACCGCTC CGCGCCAAGG CCGGCCAGAA CGTGTCGCAG
CTGCATTATG CCAAAAAAGG CATCGTCACG CCTGAAATGG AATACATCGC GATCCGCGAA
AACCAGCGGA TCGACGCGCA CCTGGCATCG CTGAACGGCA AGGCGGGCGC ATTGGCGCAC
CAGCATGCCG GCCACAGTTT CGGCGCCAAT ACGCCGAAAA GCCACATTAC CGCGGAGTTC
GTGAGGTCGG AAGTGGCAGC GGGAAGAGCG GTAATCCCCT CGAATATCAA CCACCCCGAA
AGCGAGCCAA TGATTATCGG ACGGAATTTT CTGGTGAAAA TCAATGCCAA TATCGGTAAC
TCCGCCGTTT CCTCATCCAT TGAAGAAGAG GTGGAAAAGG CCGTTTGGGC CTGCCGCTGG
GGCGCAGATA CGATCATGGA CCTCTCGACG GGCAAGAATA TCCATGAAAC CCGCGAATGG
ATCATCCGCA ACTCGCCGGT GCCGATTGGC ACGGTGCCCA TTTACCAGGC TTTGGAAAAA
GTGAACGGCA AAGCCGAAGA CCTCACGTGG GAGCTTTTCC GCGATACATT GATCGAGCAG
GCCGAGCAGG GTGTGGATTA CTTCACGATC CACGCCGGCG TGCTGCTGCG CTACATTCCG
CTCACGGCAA AGCGCATTAC CGGCATCGTG TCCCGCGGGG GATCCATCAT GGCCAAATGG
TGCCTGGCGC ATCATAAAGA GAACTTCCTC TACACGCATT TTGAGGAAAT ATGCGAGATC
ATGAAAGCCT ACGACGTGGC ATTCTCGCTA GGCGACGGCC TGCGCCCCGG CAGCATTGCC
GATGCCAACG ACGCCGCGCA ATTCGCGGAG CTGGAAACGC TGGGCGAGCT AACCAAAATC
GCCTGGAAGC ACGACGTGCA AACGATCATC GAGGGCCCCG GCCACGTACC GATGCACCTG
ATCAAGGAGA ATATGGAAAA GCAGCTGAAA CACTGCCACG AGGCGCCTTT CTACACGTTA
GGCCCCCTCA CGACCGACAT AGCGCCTGGC TACGACCACA TCACGTCGGC CATCGGCGCG
GCCATGATCG GCTGGTTCGG GACGGCCATG CTTTGCTACG TGACGCCGAA AGAGCATTTG
GGACTACCCA ATAAAAAAGA CGTGAAAGAC GGCGTGATCA CCTACAAGAT CGCCGCCCAT
GCCGCCGACC TGGCCAAAGG CCACCCGGGC GCCCAGTACC GCGACAATGC ATTGAGCAAG
GCCCGCTTCG AATTCCGATG GGAAGATCAG TTCAACCTCT CGCTCGACCC GGACACCGCC
CGCGAGTTCC ACGACGAAAC ATTACCGGCC GAAGGAGCCA AAGTCGCGCA TTTCTGCTCG
ATGTGCGGCC CCAATTTCTG TTCGATGAAA ATCACCCAGG ATGTACGCGA CTATGCCGAA
GAAAACGGAC TGGGCACCGA AGAGGCCGTG GCCGAAGGAA TGCAGCAGAA GGCACGTGAG
TTTGCGGAAA AAGGCAGTGA AATCTATTTG TAA
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| Protein sequence | MKTEKTPETI TRDPFPNSKK IYVKGQIHDI SVAMREISLN DTRIHGGPRP GRLGASEPNE
PVTVYDTSGA YTDPNIDIDV KKGLPALRAA WVRQRGDVEE LETITSEYGR MRLADAKLDH
LRFAHNARPL RAKAGQNVSQ LHYAKKGIVT PEMEYIAIRE NQRIDAHLAS LNGKAGALAH
QHAGHSFGAN TPKSHITAEF VRSEVAAGRA VIPSNINHPE SEPMIIGRNF LVKINANIGN
SAVSSSIEEE VEKAVWACRW GADTIMDLST GKNIHETREW IIRNSPVPIG TVPIYQALEK
VNGKAEDLTW ELFRDTLIEQ AEQGVDYFTI HAGVLLRYIP LTAKRITGIV SRGGSIMAKW
CLAHHKENFL YTHFEEICEI MKAYDVAFSL GDGLRPGSIA DANDAAQFAE LETLGELTKI
AWKHDVQTII EGPGHVPMHL IKENMEKQLK HCHEAPFYTL GPLTTDIAPG YDHITSAIGA
AMIGWFGTAM LCYVTPKEHL GLPNKKDVKD GVITYKIAAH AADLAKGHPG AQYRDNALSK
ARFEFRWEDQ FNLSLDPDTA REFHDETLPA EGAKVAHFCS MCGPNFCSMK ITQDVRDYAE
ENGLGTEEAV AEGMQQKARE FAEKGSEIYL
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