| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2451 |
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| Symbol | |
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| ID | 8226023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3016210 |
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| End bp | 3019671 |
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| Gene Length | 3462 bp |
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| Protein Length | 1153 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644930283 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086834 |
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| Protein GI | 255036213 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.117099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAATT TTAACCCGAC AAAAATCAAA ATTATGTCAA AAAGAGTACA ATTTCACCAT
GCTTTACAGA AAATCATGCG CATTACTCTG TATCAAGCCC TGCTCGCCAT TGCTTTCAGC
ACGATCGTTC ACGCCAACGA CGTGCGTGGC CAACGCGTGC TGGAACAAAA AGTGACGCTG
CGTTTAACCA ATTCCGAGAT TGACAAGGCA TTGGAGAAGA TTGAAAATGT GACGAAGGTT
AAATTCATGT ACAATCCTCA GATCTTCAAT AACCAGAAAA GTACCTACAA ATTCCAGGAC
GAATCGCTGT CCGAAGTACT GAACAAAATT CTGACCCCTT ACAAAGTAAC TTACGAGGTA
GTGCAGGACC GCATTATCCT CCGCCGCGAA CAGGCCGTCA TCGAAGAAAA TCCTGTTAAA
ACCGCTCCGA AACGCAATGT AACGGGGACG GTAAAGGATG AAACCGGCAC CGGCCTGCCG
GGCGTGAGCG TGCTCGTGAA AGGCACGCAG CGCGGTACTT CATCCGATGG AGATGGGAAT
TTCTCGATCG ATATCCCCGA CGGTGAAGTG GAAACCGCCG TACTGATTTT CAGCTTCGTA
GGTTATACTT CGCAGGAGGT AACCGTTGGA AACCAGACCG CCGTGAGCGT GCAGCTCGCT
CCCGAAGCCA AGGCATTGAA TGAAGTAGTG GTAACCGCTT TGGGTATTGC CAAAGAGAAA
AAGGCCCTTG CCTATGCGGT AACGGAAGTG AAAGGTGCTG AATTTACGCA AGCACGCGAA
AACAACATCG GTAACGCATT GACCGGTAAA ATCGCCGGTG TGAACGCTAC CGGTATGGCT
ACCGGCCCCG GCGGATCGAG CCGCATCGTG ATCCGCGGTA ACGGCTCACT GAATGGTAAC
AACCAGCCTT TGTATGTGAT TAACGGCATG CCGATGGACA ACACCACGCC GGGCGGAACT
ACTGCCGACG GTAACGGGAT GAACGTCGAC CGTGGAGACG GTATCGGTGG TATCAACCCC
GATGACATCG AGTCGATCAG CGTTTTGAAA GGTGGCCCCG CAGCGGCGCT TTACGGTGCA
CGTGCTTCAA ATGGTGTGAT TCTGATCACC ACCAAAAAAG GCCGCGCGCA AAAAGGCATC
GGCGTGGAGA TCAACAGCAA CACGACGTTT GAATCGCTGG CGGTGATCCC GAAATGGCAA
TATGAGTACG GCCAGGGCGT GGACGGCGTA AAACCGACCA CTTTGGAGCA GGCCAAAAGC
ACAGGACGCC TTTCGTACGG TGCGAAAATG GATGGCCAGC CTACCATTCA GGTGGACGGG
CAAATGCATC CCTACTCGCC TCAGAAAAAC AACCTGAAAA ACTTCTATAA CACCGGTACC
AACTACATCA ATTCAGTAGC ATTGACCGGC GGTAGCGAGG CGATCAACTT CCGTTTGGGC
TTGAACAACA CGAAATCGAA CAGCGTTGTG CCCAATTCTT CATTCGTTCG CCGCATTGCT
AACCTGAACC TGAATGCGTT CCTGGGTAAG AAACTGAGTG TTGAAACGGT ATTCCAATAC
AACCTCGAAC AAGGTACCAA CCGCCCGAAA GTGGGTTATG CAGACATGAA CCCGCACTGG
GCTACTTACC TGGTGGCCAA CACCGTGGAT ATCCGCAGCC TGTCGCCGGG ATTCGACGCT
GTAACCGGCA AAGAAATGGA ATGGAACCCG GTACCTGCTG CGCCAAACCC TTATTTTGTG
ATAAACAAAT TCAAAAACGA CGATACCAAA CATCGCTTTT TGAGCCAGGG AAGCCTGCGT
TACGACATTC TTGAAAACCT GTACGTGAAA GGTAGCGTGA GCCAGGATTT TTACAGCTTC
ACTTCCGAAT ACGTGCAGCC GACCAACAAT GCATTTTTCC CGCTCGGTAC TTACGAAGGA
AGAAAAACCA CTTCTTCCGA AACGAACGGT ATGGTAACCG TGAACTACAA CAAGGAGTTT
GAAAATTTCA GCTTCTCGGC CATGGCCGGT GCGAATGCAC AGCGCAGCGT TTTCGACCAA
ACGGTGATTG CAGGTAGCGA ATTCACGATC CCTTATTTTT ACAGCTATAC CAACCTCGCG
GCGATGACCA CCACGCCGAC TTACATGAAA AGCGCCATCA ACTCGCTCTT CGGTTCGGTC
GATTTTGGGT ACAAAGGCCT GGCTTATCTG ACCGTTTCGG GTCGTCAGGA CTGGTTTTCG
GTGCTGAATC CTAAAAGCAA CAGCATTTTC TACCCGTCTG TGGGTGGTTC GGTGATCCTC
TCGGAAGCGA TCAACTTCCC TTCGGCGATC AGCTTTGCGA AACTGCGTGG TTCATGGGCG
CAGGTGGGTG GTGCAACTGT GAATGCGTAT CAGATTTATC AGTACTACAA TATGCAGCAA
GGCGGCCACA ACGGTCGTCC GGTACAAGGC CTCGCTTCGT CGCAAGTGCC TAACCCCGAC
CTGAAACCGC TGACTTCGAC AACCTATGAA GGAGGTTTGG AAGCAAAATT CCTCAACAAC
CGCCTCGGAT TGGATGTGAC ATTGTATAAC AGAAAAACTA CTGACGACAT CGTTACTACC
AACATTGCAT TGTCTTCCGG CTACACTTCT GCATTGCTGA ACGTGGGCGA GCTGAGCAAC
AAAGGGATCG AGTTGCTGAT TACAGGAACA CCGGTTCAAA AAGCGAATTT CAGCTGGGAT
CTGAGCTATA ACATGGCTTA TAACAAGAGC AAAATCGAAC GTCTGGCCGA GGGAATCAAC
CAGATCGACA TTGCTACCGG TGTAGGTGGT GGTGTGGTCC GCAACGCGAT CAACAGACCT
TACGGAACTG TGTGGGGTTT CCGCAAAAAA ACCGATGCAG CCGGAAATAT CGTCTATAAC
CCTGCCAGCG GCTACGCGGT GCGCGGCGAC CTCGAAGAAA TCGGACAAGG CACGCCTCCT
TTGACCATGG GAATCACCAA CAACTTCCGT TACAAAAACT TCTCGCTGAA TGTATTGGTG
GATGGTAAAT TCGGAAGCAT TGTGTACTCC AACCTTTATC AGTATGCCTA CCGTTTCGGT
TTGCCGGTTG AAACCCTGCC AGGCCGCGAC ACCGGTGTAA CCGTGGAAGG TGTAACGCCG
GAAGGCGCTC CTTTTACCAA AACATGGGAG AAAAAGGATG TGGACACTTA CTACGACAAC
GACAAGAACT ACACCGCGAT GTTCATGTTC AACAACGACT TCATCAAGCT GCGCCAGGTG
GTATTGAGCT ACAATATCCC GGTGAACAAG CTGGCGTTCC TGAAACTGCA ATCGGCCTCG
GTATCATTCG TTGCGCGTAA CCTGGCGATC CTTTTCAAAG ACAAGAAGCA GCAGTACTTC
GATCCGGAGT CGAGCTACAC CAGCACCAAT GCACAGGGTC TGGAAGCATT CGGTGTACCA
AGAACCCGCA GCATGGGCGT GAACCTGATG GTGAAATTCT AA
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| Protein sequence | MPNFNPTKIK IMSKRVQFHH ALQKIMRITL YQALLAIAFS TIVHANDVRG QRVLEQKVTL
RLTNSEIDKA LEKIENVTKV KFMYNPQIFN NQKSTYKFQD ESLSEVLNKI LTPYKVTYEV
VQDRIILRRE QAVIEENPVK TAPKRNVTGT VKDETGTGLP GVSVLVKGTQ RGTSSDGDGN
FSIDIPDGEV ETAVLIFSFV GYTSQEVTVG NQTAVSVQLA PEAKALNEVV VTALGIAKEK
KALAYAVTEV KGAEFTQARE NNIGNALTGK IAGVNATGMA TGPGGSSRIV IRGNGSLNGN
NQPLYVINGM PMDNTTPGGT TADGNGMNVD RGDGIGGINP DDIESISVLK GGPAAALYGA
RASNGVILIT TKKGRAQKGI GVEINSNTTF ESLAVIPKWQ YEYGQGVDGV KPTTLEQAKS
TGRLSYGAKM DGQPTIQVDG QMHPYSPQKN NLKNFYNTGT NYINSVALTG GSEAINFRLG
LNNTKSNSVV PNSSFVRRIA NLNLNAFLGK KLSVETVFQY NLEQGTNRPK VGYADMNPHW
ATYLVANTVD IRSLSPGFDA VTGKEMEWNP VPAAPNPYFV INKFKNDDTK HRFLSQGSLR
YDILENLYVK GSVSQDFYSF TSEYVQPTNN AFFPLGTYEG RKTTSSETNG MVTVNYNKEF
ENFSFSAMAG ANAQRSVFDQ TVIAGSEFTI PYFYSYTNLA AMTTTPTYMK SAINSLFGSV
DFGYKGLAYL TVSGRQDWFS VLNPKSNSIF YPSVGGSVIL SEAINFPSAI SFAKLRGSWA
QVGGATVNAY QIYQYYNMQQ GGHNGRPVQG LASSQVPNPD LKPLTSTTYE GGLEAKFLNN
RLGLDVTLYN RKTTDDIVTT NIALSSGYTS ALLNVGELSN KGIELLITGT PVQKANFSWD
LSYNMAYNKS KIERLAEGIN QIDIATGVGG GVVRNAINRP YGTVWGFRKK TDAAGNIVYN
PASGYAVRGD LEEIGQGTPP LTMGITNNFR YKNFSLNVLV DGKFGSIVYS NLYQYAYRFG
LPVETLPGRD TGVTVEGVTP EGAPFTKTWE KKDVDTYYDN DKNYTAMFMF NNDFIKLRQV
VLSYNIPVNK LAFLKLQSAS VSFVARNLAI LFKDKKQQYF DPESSYTSTN AQGLEAFGVP
RTRSMGVNLM VKF
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