Gene Dfer_2444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2444 
Symbol 
ID8226016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3009250 
End bp3010746 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content53% 
IMG OID644930276 
Producthypothetical protein 
Protein accessionYP_003086827 
Protein GI255036206 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.139331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACAGT ACAGCCGCTT TATGAAGTCC GGATTTACGT CGGTGCTCGC CCTGGGCATG 
GCGTTTCATG CATTCGGACA GCAGCGGGAA GTCACGACTT CCCTCCCCAA GGCACTTCGC
GACGACATCA CCATCGAAGA GTACATGAAA GTGGAACCGG AAGCCGTCCG CCTGATCCAG
CATCCCGTCA CGGGTGAAAT TTACTACACG ACATTCTTCG GCGATGTGGT TAAAATCGTG
ATCGAAGATG GTAAGCCTGT TAGTAAAAAA CTCCTTTCTG TTGAAGATCA CGGCATTCCA
CGCCTGCAAG GTGCTGCTTT TCACGGCAAT ACTCTTTTCC TGGCGGGTAA TGTGAGTGTG
AATAACAACA AGGGCAACAA AGGCCGGATG GTCCGCTACG AAATGACAAA GGGCGCGGGA
ACACCCGGCG CCGCGAAGCC TGAAATGACC GTCGTTTTCA ACACGGTTGA ATATGGCGCT
AATAAAACCA CGTTCGATCA CGGCTGGAAT GCATTGGAAA TCAGTCCGGA CGGCAAGTAC
ATTTACGTCA ACACCGGTGC CCGCACCGAC CATGGCGAGG TGCAGGACAA TGGCGGCGAA
TACCCGAATG CCCGTGACAA TGCCCTCACC GCAAACATTT TCCGCTTTCC CATCAACTCC
AAGGACCTGG TACTATCGAC AGATCTCGCG AAACTGAAAG CAGACGGCTA CATCTTCGCA
GAAGGCATCC GCAATGCCTA CGACATGGCC TTCGACGCCA AAGGGAATCT GTTCGCGGTA
TCGAACTCCG GCGACTACGA CCATCCCGAG GACATGTTTT GGGTGCGGAA AGGACATCAT
TACGGCTTTC CCTGGATCAT GGGAGGCATC GAAAACCCGC AGCAATTCCC CGACTTCCAG
CCCGATCCCG AAAAAGATCC TTTCCTGAGC AAGTTCGCAT TCGCATTCCT CATGAAATAC
TTCCATAACG ACCCCGACTT TCCCAAAAAG CCGGCCGGCG TGAAATTTAC ACCCGCGGTA
CAAAACCTCG GCCCCGACGC CAACGAGTAC CGCGACCGCA AAACCGGGAT CGTCATGGAC
GGCGACACCA CCGGCGTTAC CGTGGGAACA TTCAATGCCC ACTCCTCCCC GCTCGGCATT
TTCTTCGACA CACACAATGC ATTGGGCAAA GAGTTCACGG GCGACGGCTT CGTGATCCGC
TACACAGGCG GCCCGCGCAA CGGAGTCGTA AACCCAAACC CATTGCGCAG GTACGGCAAA
GACCTCCTGC ATTTGGAAAT GACCTACGAT AAAAAGGCGG ACAATTACAA AACCAAAACT
ACCAGCATCG TCAACAACTT CACCGCTCCT ACCGACGCCT TGCTGGTGGG CAATACGCTG
TACGTGATCG AATATGGCGG TAAGCAAGGC GGCAACAAAG CGGGTGGCAG TCTGTGGAAA
ATCACCTTGC CGGCCAACGA AAAAATGGCA AAAAAGACCA AAAAGAAAAC CTCGTAA
 
Protein sequence
MLQYSRFMKS GFTSVLALGM AFHAFGQQRE VTTSLPKALR DDITIEEYMK VEPEAVRLIQ 
HPVTGEIYYT TFFGDVVKIV IEDGKPVSKK LLSVEDHGIP RLQGAAFHGN TLFLAGNVSV
NNNKGNKGRM VRYEMTKGAG TPGAAKPEMT VVFNTVEYGA NKTTFDHGWN ALEISPDGKY
IYVNTGARTD HGEVQDNGGE YPNARDNALT ANIFRFPINS KDLVLSTDLA KLKADGYIFA
EGIRNAYDMA FDAKGNLFAV SNSGDYDHPE DMFWVRKGHH YGFPWIMGGI ENPQQFPDFQ
PDPEKDPFLS KFAFAFLMKY FHNDPDFPKK PAGVKFTPAV QNLGPDANEY RDRKTGIVMD
GDTTGVTVGT FNAHSSPLGI FFDTHNALGK EFTGDGFVIR YTGGPRNGVV NPNPLRRYGK
DLLHLEMTYD KKADNYKTKT TSIVNNFTAP TDALLVGNTL YVIEYGGKQG GNKAGGSLWK
ITLPANEKMA KKTKKKTS