Gene Dfer_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2420 
Symbol 
ID8225992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2982627 
End bp2983400 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content54% 
IMG OID644930252 
ProductAMP nucleosidase 
Protein accessionYP_003086803 
Protein GI255036182 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01721] AMP nucleosidase, putative 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA AAGAACAGAT CGTCGAAAAC TGGCTCCCGC GTTACACCGG CACGCCCGTG 
GAGGAGTTTG GGAACTACAT TTTGCTCACC AACTTCGGGA ATTACGTGAC TATGTTCGCC
GAAAAATTCG GGGTGGAAGT GCGGGGGGCT GGCCGGGCTA TGCAAACCGC CACGGCGAAG
GACATTACCA TCATCAATTT CGGGATGGGA AGTCCGATGG CTGCCACGGT AATGGATTTA
TTATCAGCCA TTAACCCGAA AGCAGTATTG TTTCTGGGTA AATGCGGCGG GTTGAAAAAA
ACGCAGGTCG GCGACCTTAT CCTTCCCATT GCCGCCATTC GCGGCGAGGG TACCAGCGAC
GATTACATGC CCGCTGAAAT CCCCGCGCTG CCATCGTTCC GCCTGCAAAG CACCGTCTCC
GCCGCCATCA AAAAGCACAA ACTCGACTAT TGGACCGGCA CCGTTTACAC CACAAACCGC
CGCATTTGGG AGCACGACGA TAGTTTTAAA GAATACCTTC GCGCCATTCG GGCCATGGCA
ATCGACATGG AAACGGCCAC GATATTCATT GTCGGCTTCG CCAATTCGAT TCCGCACGGC
GCATTGCTGC TCGTTTCGGA CAACCCGCTT GTTCCGGAAG GTGTCAAAAC GGAAGAAAGC
GACAAGAAAG TGACCACCAG CTATGTGATG CAGCATCTCG AGATCGGCAT CGATGCGTTG
ACGGAGCTCG CGCGGTCGGG AGAGTCGGTT AAACATTTGC GGTTCGAGAG CTGA
 
Protein sequence
MTTKEQIVEN WLPRYTGTPV EEFGNYILLT NFGNYVTMFA EKFGVEVRGA GRAMQTATAK 
DITIINFGMG SPMAATVMDL LSAINPKAVL FLGKCGGLKK TQVGDLILPI AAIRGEGTSD
DYMPAEIPAL PSFRLQSTVS AAIKKHKLDY WTGTVYTTNR RIWEHDDSFK EYLRAIRAMA
IDMETATIFI VGFANSIPHG ALLLVSDNPL VPEGVKTEES DKKVTTSYVM QHLEIGIDAL
TELARSGESV KHLRFES