| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2412 |
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| Symbol | |
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| ID | 8225984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2977159 |
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| End bp | 2977845 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644930244 |
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| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
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| Protein accession | YP_003086795 |
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| Protein GI | 255036174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.390544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCCGCC GTCTGCAATT CATTGCGCTC CGAATCTTCC TCGCATTTAT CGTGATTTCA
GTCGTTTGGG TGGTTGTTTT GAGGTTTGTG CCTGTCTGGG TAACGCCCTA TATGATTTCC
CGTAAAATCG ACGCTTTCAA GGCTGATGAG GATACGGAGA TCCACCACGA CTGGGAGCCG
TATGAGAATA TTTCGAAAGA GGCCGCATTG GCGGTAGTGG CCTCCGAAGA TCAGAATTTT
CCCAACCATT GGGGCTTCGA CTTCGACCAG ATCTACAACG CCATGACCGA GGACCGCAAG
CGTGCCCGTG GTGCCAGTAC CATTTCCCAG CAAGTTGCGA AGAATGTCTT CCTCTGGCAC
GGGCGCAGTT TCATCCGCAA AGGCCTTGAA GCCTATTTCA CCGTCCTCAT CGAAGTACTT
TGGAGCAAGA AGCGGATTTT GGAAGTGTAT TTGAATGTGG CTGAAATGGG TAAGATGACA
TTCGGAGTGG AGGCGGCTTC GCTACGTTAC TACAATAAAT CGGCCAAACG CCTGACGCGC
TACGAGGCCG CGCGGATCGC CGCAGTACTC CCGAACCCGA TCCGTTTCTC GATCCAGAAC
CCATCTGCGT ATGTGAACAA GCGTACCAAT CAGATCGTCC GGCAAATGCG GTATCTGGGC
GGGCAGAAGT ATTTGGCTGA CTTATAG
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| Protein sequence | MLRRLQFIAL RIFLAFIVIS VVWVVVLRFV PVWVTPYMIS RKIDAFKADE DTEIHHDWEP
YENISKEAAL AVVASEDQNF PNHWGFDFDQ IYNAMTEDRK RARGASTISQ QVAKNVFLWH
GRSFIRKGLE AYFTVLIEVL WSKKRILEVY LNVAEMGKMT FGVEAASLRY YNKSAKRLTR
YEAARIAAVL PNPIRFSIQN PSAYVNKRTN QIVRQMRYLG GQKYLADL
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